Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28260 Brassica napus
Aa31LG9G11180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2659 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2670 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.888 Anthoceros agrestis
Actinidia27313 Actinidia chinensis
Ah.04g153110 Amaranthus hybridus
AL6G45040 Arabidopsis lyrata
Aqoxy5G04294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TG80C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GB8HVP Arachis hypogaea
AT4G10950 Arabidopsis thaliana
ATR0602G040 Amborella trichopoda
Atru.chr9.1966 Acer truncatum
AUR62010855 Chenopodium quinoa
AUR62019853 Chenopodium quinoa
BcaB01g01565 Brassica carinata
BcaC04g21089 Brassica carinata
BolC9t56416H Brassica oleracea
BraA09t38395Z Brassica rapa
C09p35820 Brassica napus
CAN.G1804.17 Capsicum annuum
CAN.G1804.18 Capsicum annuum
CANSAT21G1895 Cannabis sativa
CARHR255660 Cardamine hirsuta
Carub.0006s2969 Capsella rubella
Cc08_g16200 Coffea canephora
CDE10G1152 Ceratophyllum demersum
Ciclev10023992m.g Citrus clementina
CiPaw.12G081700 Carya illinoinensis
ClCG07G011520 Citrullus lanatus
COL.COLO4_10716 Corchorus olitorius
Cpa.g.sc571.1 Carica papaya
CsaV3_3G020460 Cucumis sativus L.
CsaV3_4G006690 Cucumis sativus L.
CsaV3_5G029330 Cucumis sativus L.
CSS0002698 Camellia sinensis var. sinensis
CSS0031016 Camellia sinensis var. sinensis
DCAR_028400 Daucus carota
Dinv37520 Davidia involucrata
Duzib205G1871 Durio zibethinus
ECA240G3897 Erigeron canadensis
ECA240G4646 Erigeron canadensis
ECA248G0924 Erigeron canadensis
EL10Ac5g12931 Beta vulgaris
Eucgr.D01753 Eucalyptus grandis
FAN04G1616 Fragaria x ananassa
FAN04G1997 Fragaria x ananassa
FAN08G1908 Fragaria x ananassa
FAN13G2620 Fragaria x ananassa
FAN18G3962 Fragaria x ananassa
FAN18G4476 Fragaria x ananassa
FAN18G4505 Fragaria x ananassa
FvH4_5g04800 Fragaria vesca
FvH4_5g29220 Fragaria vesca
Glyma.01G226300 Glycine max
Glyma.11G016400 Glycine max
Gohir.A09G190000 Gossypium hirsutum
Gohir.D09G184700 Gossypium hirsutum
Gorai.006G207200 Gossypium raimondii
GSVIVG01019553001 Vitis vinifera
HanXRQChr13g0415421 Helianthus annuus
Haze_09082 Corylus avellana
Hma1.2p1_0359F.1_g135170 Hydrangea macrophylla
HPP92_002924 Vanilla planifolia
HPP92_028637 Vanilla planifolia
Hund14212 Selenicereus undatus
Lalb_Chr09g0320601 Lupinus albus
Lj2C165T12 Lonicera japonica
Lj5g0026493 Lotus japonicus
Lsat_1_v5_gn_6_8360 Lactuca sativa
Lsat_1_v5_gn_6_83741 Lactuca sativa
Manes.02G008800 Manihot esculenta
Mapoly0019s0044 Marchantia polymorpha
Mapoly0031s0054 Marchantia polymorpha
MBI06_g41629_MAGBIO Magnolia biondii
MBI06_g46248_MAGBIO Magnolia biondii
MD06G1109100 Malus domestica
MD14G1130100 Malus domestica
Medtr5g009100 Medicago truncatula
MELO3C016472.2 Cucumis melo
Migut.A00627 Erythranthe guttata
MSTRG.25688 Avicennia marina
Nitab4.5_0000359g0160 Nicotiana tabacum
Nitab4.5_0000798g0010 Nicotiana tabacum
Nitab4.5_0001210g0160 Nicotiana tabacum
Nitab4.5_0001210g0170 Nicotiana tabacum
Nitab4.5_0006775g0030 Nicotiana tabacum
Nitab4.5_0006775g0050 Nicotiana tabacum
Nitab4.5_0006775g0060 Nicotiana tabacum
Nitab4.5_0018912g0010 Nicotiana tabacum
Nn3g18990 Nelumbo nucifera
Oeu055030.1 Olea europaea
Os02g0290900 Oryza sativa ssp. japonica
Peaxi162Scf00111g00716 Petunia axillaris
Peaxi162Scf00280g00033 Petunia axillaris
Peaxi162Scf00714g00529 Petunia axillaris
PGR031G2300 Punica granatum
PGSC0003DMG400012140 Solanum tuberosum
Phvul.002G165200 Phaseolus vulgaris
Potri.003G141300 Populus trichocarpa
Potri.007G062342 Populus trichocarpa
Prupe.5G122000 Prunus persica
Psat2g185400 Pisum sativum
PSO063G2420 Papaver somniferum
PSO170G2142 Papaver somniferum
QL02p030133 Quercus lobata
RcHm_v2.0_Chr7g0194451 Rosa chinensis
Rhsim07G0081600 Rhododendron simsii
Sabra03G0101800 Salix brachista
Sc22g0004950 Simmondsia chinensis
Sed0019294 Sechium edule
SEGI_24571 Sequoiadendron giganteum
SGA_v2.0_scaffold96G29026 Striga asiatica
SMO203G0083 Selaginella moellendorffii
SMO358G0153 Selaginella moellendorffii
SMO358G0512 Selaginella moellendorffii
Solyc08g082490.3 Solanum lycopersicum
Solyc08g082500.2 Solanum lycopersicum
Sopen08g030740 Solanum pennellii
Sopen08g030750 Solanum pennellii
Sp6g06540 Schrenkiella parvula
TAR375G0581 Trochodendron aralioides
THA.LOC104806436 Tarenaya hassleriana
Thecc.03G300000 Theobroma cacao
Thhalv10028704m.g Eutrema salsugineum
TPR.G37949 Trifolium pratense
TWI15G0802 Tripterygium wilfordii
TWI81G0782 Tripterygium wilfordii
vmacro13891 Vaccinium macrocarpon
VMungo1215G2791 Vigna mungo
Zm00001eb237060 Zea mays

User provided reference genes

Program Settings