Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p12930 Brassica napus
Aa31LG3G11590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.382 Anthoceros agrestis
Actinidia26779 Actinidia chinensis
Actinidia30411 Actinidia chinensis
Actinidia37157 Actinidia chinensis
AL8G31220 Arabidopsis lyrata
Aqoxy1G04252 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea
AT5G55640 Arabidopsis thaliana
ATR0624G098 Amborella trichopoda
Atru.BG.148.p Acer truncatum
AUR62017085 Chenopodium quinoa
AUR62036411 Chenopodium quinoa
AUR62036442 Chenopodium quinoa
BcaB08g35925 Brassica carinata
BcaC04g19914 Brassica carinata
BcaC04g20171 Brassica carinata
BcaC04g20212 Brassica carinata
BolC9t57514H Brassica oleracea
BolC9t57844H Brassica oleracea
BolC9t57846H Brassica oleracea
BraA10t43385Z Brassica rapa
C09p46620 Brassica napus
C09p47070 Brassica napus
C09p49910 Brassica napus
CANSAT11G0122 Cannabis sativa
CARHR268960 Cardamine hirsuta
Carub.0008s1601 Capsella rubella
Ca_06392_v3 Cicer arietinum L.
CBR_g27765 Chara braunii
Cc05_g14880 Coffea canephora
CDE10G1040 Ceratophyllum demersum
CDE10G1343 Ceratophyllum demersum
Cfa020200 Carpinus fangiana
Ciclev10009817m.g Citrus clementina
CiPaw.11G203100 Carya illinoinensis
CiPaw.12G137600 Carya illinoinensis
ClCG09G021250 Citrullus lanatus
COL.COLO4_09820 Corchorus olitorius
Cpa.g.sc12.154 Carica papaya
CsaV3_7G015090 Cucumis sativus L.
CSS0023895 Camellia sinensis var. sinensis
CSS0025987 Camellia sinensis var. sinensis
CSS0049690 Camellia sinensis var. sinensis
DCAR_018844 Daucus carota
Dinv10325 Davidia involucrata
Dinv40851 Davidia involucrata
Duzib213G0633 Durio zibethinus
ECA246G3128 Erigeron canadensis
EL10Ac4g07594 Beta vulgaris
Eucgr.F02053 Eucalyptus grandis
FAN11G0697 Fragaria x ananassa
FAN21G3132 Fragaria x ananassa
FAN25G0770 Fragaria x ananassa
FvH4_3g29370 Fragaria vesca
Glyma.02G300000 Glycine max
Glyma.14G013900 Glycine max
Gohir.A04G006200 Gossypium hirsutum
Gohir.D05G383300 Gossypium hirsutum
Gorai.009G449900 Gossypium raimondii
GSVIVG01014668001 Vitis vinifera
HanXRQChr08g0231191 Helianthus annuus
Haze_09815 Corylus avellana
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla
HPP92_006039 Vanilla planifolia
Hund23125 Selenicereus undatus
Lalb_Chr04g0247881 Lupinus albus
Lj6g0020710 Lotus japonicus
Lj8A178T78 Lonicera japonica
Lsat_1_v5_gn_5_1420 Lactuca sativa
Manes.03G140800 Manihot esculenta
Manes.15G060600 Manihot esculenta
Mapoly0038s0106 Marchantia polymorpha
MBI16_g07767_MAGBIO Magnolia biondii
MBI19_g12833_MAGBIO Magnolia biondii
MD03G1184300 Malus domestica
MD11G1201100 Malus domestica
Medtr5g095700 Medicago truncatula
MELO3C024930.2 Cucumis melo
Migut.H01759 Erythranthe guttata
MSTRG.13019 Avicennia marina
Nitab4.5_0000461g0270 Nicotiana tabacum
Nitab4.5_0014607g0010 Nicotiana tabacum
Nn1g03196 Nelumbo nucifera
Oeu049375.1 Olea europaea
Oeu049390.1 Olea europaea
Oeu057095.1 Olea europaea
Os03g0412200 Oryza sativa ssp. japonica
Os03g0595200 Oryza sativa ssp. japonica
Peaxi162Scf01164g00127 Petunia axillaris
PGR083G1797 Punica granatum
PGSC0003DMG400022173 Solanum tuberosum
Phvul.008G278700 Phaseolus vulgaris
Potri.001G367200 Populus trichocarpa
Pp3c5_24890 Physcomitrium patens
Pp3c6_3770 Physcomitrium patens
Prupe.4G242300 Prunus persica
PSO210G6324 Papaver somniferum
PSO302G0279 Papaver somniferum
QL08p004311 Quercus lobata
QL08p004337 Quercus lobata
QL11p054318 Quercus lobata
RcHm_v2.0_Chr5g0053761 Rosa chinensis
Rhsim04G0012900 Rhododendron simsii
Sabra16G0240500 Salix brachista
Sc16g0008020 Simmondsia chinensis
Sed0006731 Sechium edule
Sed0014433 Sechium edule
SEGI_16066 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04406 Striga asiatica
SMO145G0101 Selaginella moellendorffii
Solyc07g065480.3 Solanum lycopersicum
Sopen07g033690 Solanum pennellii
Sp6g17560 Schrenkiella parvula
TAR371G0507 Trochodendron aralioides
TAR626G0711 Trochodendron aralioides
THA.LOC104811656 Tarenaya hassleriana
Thecc.07G014800 Theobroma cacao
Thhalv10014966m.g Eutrema salsugineum
TPR.G8617 Trifolium pratense
TWI38G0037 Tripterygium wilfordii
TWI39G1162 Tripterygium wilfordii
unitig_0.g996 Utricularia gibba
vmacro09651 Vaccinium macrocarpon
VMungo0647G1823 Vigna mungo
Zm00001eb019850 Zea mays
Zm00001eb049780 Zea mays

User provided reference genes

Program Settings