Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39700 Brassica napus
A06p36210 Brassica napus
Aa31LG11G4600 Aethionema arabicum
Actinidia13250 Actinidia chinensis
Ah.16g102520 Amaranthus hybridus
AL6G37300 Arabidopsis lyrata
Aqoxy3G03159 Aquilegia oxysepala
Aqoxy5G03332 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea
AT5G25500 Arabidopsis thaliana
ATR1156G046 Amborella trichopoda
Atru.chr7.2264 Acer truncatum
Atru.chr7.2387 Acer truncatum
AUR62012126 Chenopodium quinoa
AUR62040710 Chenopodium quinoa
BcaB07g29994 Brassica carinata
BcaNung07110 Brassica carinata
BolC2t12011H Brassica oleracea
BolC7t44761H Brassica oleracea
BraA02t08935Z Brassica rapa
BraA06t26543Z Brassica rapa
C02p59480 Brassica napus
C07p42320 Brassica napus
CANSAT54G2252 Cannabis sativa
CARHR187880 Cardamine hirsuta
Carub.0006s2336 Capsella rubella
Ca_12577_v3 Cicer arietinum L.
Cc08_g00970 Coffea canephora
Cfa016290 Carpinus fangiana
Ciclev10010344m.g Citrus clementina
CiPaw.05G262300 Carya illinoinensis
ClCG05G017070 Citrullus lanatus
COL.COLO4_00195 Corchorus olitorius
Cpa.g.sc533.2 Carica papaya
CsaV3_3G046550 Cucumis sativus L.
CSS0032500 Camellia sinensis var. sinensis
DCAR_006233 Daucus carota
Dinv30168 Davidia involucrata
Duzib168G0728 Durio zibethinus
Duzib187G0736 Durio zibethinus
ECA233G3411 Erigeron canadensis
EL10Ac2g04715 Beta vulgaris
Eucgr.C01786 Eucalyptus grandis
FAN20G0928 Fragaria x ananassa
FAN24G3345 Fragaria x ananassa
FAN27G0629 Fragaria x ananassa
FvH4_2g29530 Fragaria vesca
Glyma.05G173000 Glycine max
Glyma.09G122801 Glycine max
Gohir.1Z049673 Gossypium hirsutum
Gohir.A09G019700 Gossypium hirsutum
Gohir.D09G019000 Gossypium hirsutum
Gorai.006G022700 Gossypium raimondii
GSVIVG01035523001 Vitis vinifera
HanXRQChr13g0402681 Helianthus annuus
Haze_00046 Corylus avellana
HPP92_000893 Vanilla planifolia
Lalb_Chr25g0279781 Lupinus albus
Lj5g0011751 Lotus japonicus
Lj8C25T21 Lonicera japonica
Lsat_1_v5_gn_5_105001 Lactuca sativa
Manes.16G120100 Manihot esculenta
MBI04_g24206_MAGBIO Magnolia biondii
MD08G1146200 Malus domestica
MD15G1118500 Malus domestica
MD15G1119600 Malus domestica
MD15G1122300 Malus domestica
MELO3C003684.2 Cucumis melo
Migut.A00055 Erythranthe guttata
Nitab4.5_0002007g0090 Nicotiana tabacum
Nitab4.5_0002007g0100 Nicotiana tabacum
Nitab4.5_0002007g0110 Nicotiana tabacum
Nitab4.5_0004440g0020 Nicotiana tabacum
Nitab4.5_0004440g0040 Nicotiana tabacum
Nitab4.5_0009119g0010 Nicotiana tabacum
Nitab4.5_0009247g0010 Nicotiana tabacum
Nitab4.5_0011591g0010 Nicotiana tabacum
Nitab4.5_0011591g0020 Nicotiana tabacum
Nitab4.5_0011728g0010 Nicotiana tabacum
Nitab4.5_0011728g0020 Nicotiana tabacum
Nitab4.5_0012587g0010 Nicotiana tabacum
Nitab4.5_0012587g0020 Nicotiana tabacum
Nitab4.5_0013543g0010 Nicotiana tabacum
Nitab4.5_0017994g0010 Nicotiana tabacum
Nn2g11964 Nelumbo nucifera
Oeu034743.2 Olea europaea
Os11g0207300 Oryza sativa ssp. japonica
Peaxi162Scf00108g00048 Petunia axillaris
Peaxi162Scf00108g00056 Petunia axillaris
Peaxi162Scf00108g00063 Petunia axillaris
Peaxi162Scf00327g00039 Petunia axillaris
Peaxi162Scf00365g00022 Petunia axillaris
PGR042G2797 Punica granatum
PGSC0003DMG400020787 Solanum tuberosum
Phvul.003G021200 Phaseolus vulgaris
Potri.006G251400 Populus trichocarpa
Prupe.1G474900 Prunus persica
PSO017G3814 Papaver somniferum
PSO349G0250 Papaver somniferum
QL01p053808 Quercus lobata
QL09p012798 Quercus lobata
QL10p065406 Quercus lobata
QL10p065634 Quercus lobata
RcHm_v2.0_Chr6g0298391 Rosa chinensis
Rhsim02G0195500 Rhododendron simsii
Rhsim02G0198300 Rhododendron simsii
Rhsim09G0014000 Rhododendron simsii
Sabra06G0196500 Salix brachista
SalBow6G2105 Salvia bowleyana
SalBow7G3196 Salvia bowleyana
Sc11g0007780 Simmondsia chinensis
Sed0000756 Sechium edule
SEGI_41370 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09144 Striga asiatica
SHI18572 Sapria himalayana
Solyc08g061450.3 Solanum lycopersicum
Sopen08g016790 Solanum pennellii
Sp2g22030 Schrenkiella parvula
TAR625G0243 Trochodendron aralioides
THA.LOC104810431 Tarenaya hassleriana
Thecc.09G149800 Theobroma cacao
Thhalv10005310m.g Eutrema salsugineum
TWI32G0967 Tripterygium wilfordii
unitig_32.g11479 Utricularia gibba
VMungo1215G1712 Vigna mungo
Zm00001eb090760 Zea mays

User provided reference genes

Program Settings