Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p28020 Brassica napus
A09p41030 Brassica napus
Aa31LG4G10600 Aethionema arabicum
Aa31LG7G7670 Aethionema arabicum
Actinidia13509 Actinidia chinensis
Actinidia15046 Actinidia chinensis
Ah.02g129920 Amaranthus hybridus
AL1G37550 Arabidopsis lyrata
AL2G29650 Arabidopsis lyrata
Aqoxy3G01008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S6CLIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0668Y Arachis hypogaea
AT1G23790 Arabidopsis thaliana
AT1G70340 Arabidopsis thaliana
ATR0730G107 Amborella trichopoda
Atru.chr11.2022 Acer truncatum
AUR62005377 Chenopodium quinoa
AUR62014040 Chenopodium quinoa
BcaB03g11954 Brassica carinata
BcaC05g26291 Brassica carinata
BcaC07g39214 Brassica carinata
BolC5t30996H Brassica oleracea
BolC8t49855H Brassica oleracea
BraA08t34732Z Brassica rapa
BraA09t39596Z Brassica rapa
C05p22970 Brassica napus
C08p22100 Brassica napus
CAN.G388.57 Capsicum annuum
CANSAT01G2807 Cannabis sativa
CARHR024210 Cardamine hirsuta
CARHR063520 Cardamine hirsuta
Carub.0001s2330 Capsella rubella
Carub.0002s1703 Capsella rubella
Ca_04598_v3 Cicer arietinum L.
Cc11_g14660 Coffea canephora
CDE05G0223 Ceratophyllum demersum
Cfa009143 Carpinus fangiana
Ciclev10031068m.g Citrus clementina
CiPaw.05G150800 Carya illinoinensis
ClCG08G018070 Citrullus lanatus
COL.COLO4_36966 Corchorus olitorius
Cpa.g.sc69.30 Carica papaya
CsaV3_2G024570 Cucumis sativus L.
CSS0045437 Camellia sinensis var. sinensis
DCAR_031102 Daucus carota
Dinv15302 Davidia involucrata
Dinv24859 Davidia involucrata
Duzib248G1152 Durio zibethinus
Duzib268G1676 Durio zibethinus
ECA233G2480 Erigeron canadensis
ECA234G3466 Erigeron canadensis
EL10Ac6g13672 Beta vulgaris
Eucgr.B03344 Eucalyptus grandis
FAN07G1798 Fragaria x ananassa
FAN12G2269 Fragaria x ananassa
FAN17G2219 Fragaria x ananassa
FAN22G0662 Fragaria x ananassa
FvH4_4g34410 Fragaria vesca
Glyma.01G031300 Glycine max
Glyma.02G034500 Glycine max
Gohir.A03G140000 Gossypium hirsutum
Gohir.D02G162800 Gossypium hirsutum
Gorai.005G182800 Gossypium raimondii
GSVIVG01020241001 Vitis vinifera
HanXRQChr08g0208801 Helianthus annuus
HanXRQChr17g0569811 Helianthus annuus
Haze_12177 Corylus avellana
Hma1.2p1_0867F.1_g230180 Hydrangea macrophylla
HPP92_003802 Vanilla planifolia
Hund05994 Selenicereus undatus
Hund25346 Selenicereus undatus
Lalb_Chr05g0216901 Lupinus albus
Lj2g0021682 Lotus japonicus
Lj3C1052T10 Lonicera japonica
Lsat_1_v5_gn_4_5860 Lactuca sativa
Lsat_1_v5_gn_8_157120 Lactuca sativa
Manes.12G029000 Manihot esculenta
MBI16_g26454_MAGBIO Magnolia biondii
MD13G1091800 Malus domestica
MD16G1092400 Malus domestica
Medtr5g034370 Medicago truncatula
MELO3C010661.2 Cucumis melo
Migut.L01414 Erythranthe guttata
MSTRG.7899 Avicennia marina
Nitab4.5_0000113g0290 Nicotiana tabacum
Nitab4.5_0002494g0010 Nicotiana tabacum
Nitab4.5_0004308g0060 Nicotiana tabacum
Nn4g22799 Nelumbo nucifera
Oeu056733.2 Olea europaea
Os01g0108800 Oryza sativa ssp. japonica
Peaxi162Scf00338g00223 Petunia axillaris
PGR102G0434 Punica granatum
PGSC0003DMG400030993 Solanum tuberosum
Phvul.002G071800 Phaseolus vulgaris
Potri.008G192300 Populus trichocarpa
Potri.010G038600 Populus trichocarpa
Prupe.1G254000 Prunus persica
Psat2g106200 Pisum sativum
PSO063G5642 Papaver somniferum
PSO832G2552 Papaver somniferum
QL08p001512 Quercus lobata
RcHm_v2.0_Chr4g0443831 Rosa chinensis
Rhsim12G0120000 Rhododendron simsii
RhsimUnG0193300 Rhododendron simsii
Sabra08G0145800 Salix brachista
Sabra10G0027600 Salix brachista
SalBow2G2423 Salvia bowleyana
Sc11g0001190 Simmondsia chinensis
Sed0004489 Sechium edule
SEGI_07181 Sequoiadendron giganteum
SEGI_11236 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38244 Striga asiatica
SHI27223 Sapria himalayana
Solyc05g005580.3 Solanum lycopersicum
Sp1g21170 Schrenkiella parvula
Sp5g25460 Schrenkiella parvula
TAR371G0352 Trochodendron aralioides
TAR629G1031 Trochodendron aralioides
TAR680G0005 Trochodendron aralioides
TAR680G0006 Trochodendron aralioides
THA.LOC104808945 Tarenaya hassleriana
Thecc.02G248500 Theobroma cacao
Thhalv10007309m.g Eutrema salsugineum
TPR.G13569 Trifolium pratense
TWI36G1131 Tripterygium wilfordii
TWI75G0496 Tripterygium wilfordii
unitig_22.g6465 Utricularia gibba
unitig_25.g30566 Utricularia gibba
vmacro16252 Vaccinium macrocarpon
VMungo1215G1082 Vigna mungo
Zm00001eb126560 Zea mays
Zm00001eb256770 Zea mays
Zm00001eb390870 Zea mays

User provided reference genes

Program Settings