Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36370 Brassica napus
A09p06110 Brassica napus
Aa31LG8G1080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1659 Anthoceros agrestis
Actinidia14664 Actinidia chinensis
AL3G45760 Arabidopsis lyrata
AL6G37590 Arabidopsis lyrata
AL6G37630 Arabidopsis lyrata
Aqoxy7G01589 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.96RWGK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFGD5J Arachis hypogaea
AT5G25760 Arabidopsis thaliana
ATR0315G118 Amborella trichopoda
ATR0572G001 Amborella trichopoda
ATR0804G083 Amborella trichopoda
Atru.chr7.2144 Acer truncatum
AUR62036615 Chenopodium quinoa
AUR62039499 Chenopodium quinoa
BcaB04g19769 Brassica carinata
BcaC04g23587 Brassica carinata
BcaC04g23589 Brassica carinata
BcaNung03927 Brassica carinata
BcaNung04842 Brassica carinata
BolC7t44745H Brassica oleracea
BolC9t53594H Brassica oleracea
BraA06t26559Z Brassica rapa
BraA09t36252Z Brassica rapa
C07p42140 Brassica napus
C09p06730 Brassica napus
CAN.G309.86 Capsicum annuum
CANSAT11G0277 Cannabis sativa
CARHR187650 Cardamine hirsuta
Carub.0006s2354 Capsella rubella
Ca_15611_v3 Cicer arietinum L.
Cc08_g09140 Coffea canephora
CDE05G1861 Ceratophyllum demersum
Cfa004426 Carpinus fangiana
Ciclev10009771m.g Citrus clementina
CiPaw.12G043600 Carya illinoinensis
COL.COLO4_18681 Corchorus olitorius
Cpa.g.sc78.68 Carica papaya
Cre05.g240150 Chlamydomonas reinhardtii
CsaV3_2G031000 Cucumis sativus L.
CSS0002876 Camellia sinensis var. sinensis
CSS0027155 Camellia sinensis var. sinensis
CSS0042090 Camellia sinensis var. sinensis
DCAR_003117 Daucus carota
DCAR_007708 Daucus carota
Dinv14240 Davidia involucrata
Duzib168G0597 Durio zibethinus
EL10Ac8g19868 Beta vulgaris
Eucgr.E03515 Eucalyptus grandis
Eucgr.L00924 Eucalyptus grandis
Eucgr.L01100 Eucalyptus grandis
FAN15G1440 Fragaria x ananassa
FAN27G0096 Fragaria x ananassa
FvH4_2g35960 Fragaria vesca
Glyma.04G081200 Glycine max
Glyma.06G082900 Glycine max
Gohir.A06G094500 Gossypium hirsutum
Gohir.A07G023200 Gossypium hirsutum
Gohir.D06G094100 Gossypium hirsutum
Gohir.D07G026800 Gossypium hirsutum
Gorai.001G027800 Gossypium raimondii
Gorai.010G108600 Gossypium raimondii
GSVIVG01035654001 Vitis vinifera
HanXRQChr06g0181091 Helianthus annuus
Haze_09966 Corylus avellana
HPP92_003931 Vanilla planifolia
Hund21455 Selenicereus undatus
Lalb_Chr08g0243201 Lupinus albus
Lalb_Chr23g0269531 Lupinus albus
Lj1g0000466 Lotus japonicus
Lj7C705G9 Lonicera japonica
Lj8C590G3 Lonicera japonica
Lj8C599G3 Lonicera japonica
Lsat_1_v5_gn_6_66261 Lactuca sativa
Manes.03G062150 Manihot esculenta
Manes.16G071900 Manihot esculenta
Mapoly0029s0150 Marchantia polymorpha
MBI01_g30747_MAGBIO Magnolia biondii
MD08G1116800 Malus domestica
MD15G1096300 Malus domestica
Medtr3g110110 Medicago truncatula
MELO3C011153.2 Cucumis melo
Migut.A00226 Erythranthe guttata
MSTRG.11709 Avicennia marina
Nitab4.5_0000664g0280 Nicotiana tabacum
Nitab4.5_0001567g0110 Nicotiana tabacum
Nn2g11681 Nelumbo nucifera
Nn3g18088 Nelumbo nucifera
Oeu008294.2 Olea europaea
Oeu019245.1 Olea europaea
Os02g0634800 Oryza sativa ssp. japonica
Peaxi162Scf00276g00211 Petunia axillaris
PGR004G1236 Punica granatum
PGSC0003DMG402018585 Solanum tuberosum
Phvul.009G107200 Phaseolus vulgaris
Potri.006G240900 Populus trichocarpa
Potri.018G039200 Populus trichocarpa
Pp3c26_5580 Physcomitrium patens
PRCOL_00003018 Prasinoderma coloniale
Prupe.1G451200 Prunus persica
Psat5g023400 Pisum sativum
PSO566G0002 Papaver somniferum
PSO782G1496 Papaver somniferum
QL12p029531 Quercus lobata
RcHm_v2.0_Chr6g0305911 Rosa chinensis
Rhsim02G0180700 Rhododendron simsii
Sabra06G0188300 Salix brachista
Sabra18G0039300 Salix brachista
SalBow1G4375 Salvia bowleyana
SalBow4G0289 Salvia bowleyana
Sc09g0009200 Simmondsia chinensis
Sed0005860 Sechium edule
Sed0027283 Sechium edule
SGA_v2.0_scaffold185G40039 Striga asiatica
Sp2g21860 Schrenkiella parvula
TAR636G1716 Trochodendron aralioides
THA.LOC104815056 Tarenaya hassleriana
Thecc.09G041500 Theobroma cacao
Thhalv10005728m.g Eutrema salsugineum
TPR.G1353 Trifolium pratense
TWI32G1013 Tripterygium wilfordii
TWI63G1051 Tripterygium wilfordii
unitig_37.g12112 Utricularia gibba
vmacro00934 Vaccinium macrocarpon
vmacro11072 Vaccinium macrocarpon
VMungo1309G1656 Vigna mungo
Zm00001eb185480 Zea mays
Zm00001eb185530 Zea mays
Zm00001eb248190 Zea mays
Zm00001eb248200 Zea mays

User provided reference genes

Program Settings