Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p08480 Brassica napus
Aa31sc402G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis
Actinidia08037 Actinidia chinensis
Actinidia08038 Actinidia chinensis
Ah.08g218690 Amaranthus hybridus
AL8G24240 Arabidopsis lyrata
Aqoxy5G03714 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea
AT5G50210 Arabidopsis thaliana
ATR0122G015 Amborella trichopoda
Atru.chr9.2596 Acer truncatum
AUR62001201 Chenopodium quinoa
AUR62022128 Chenopodium quinoa
BcaB08g35393 Brassica carinata
BcaC04g20813 Brassica carinata
BolC9t56752H Brassica oleracea
BraSC37t46157Z Brassica rapa
C09p38860 Brassica napus
CAN.G126.48 Capsicum annuum
CANSAT80G0711 Cannabis sativa
CARHR258410 Cardamine hirsuta
Carub.0008s1022 Capsella rubella
Ca_19423_v3 Cicer arietinum L.
CBR_g20372 Chara braunii
CBR_g50939 Chara braunii
Cc04_g11340 Coffea canephora
CDE09G1335 Ceratophyllum demersum
Cfa019232 Carpinus fangiana
Ciclev10019026m.g Citrus clementina
CiPaw.11G018700 Carya illinoinensis
ClCG03G003080 Citrullus lanatus
COL.COLO4_20642 Corchorus olitorius
Cpa.g.sc159.10 Carica papaya
Cre06.g251450 Chlamydomonas reinhardtii
CsaV3_1G008930 Cucumis sativus L.
CSS0021677 Camellia sinensis var. sinensis
DCAR_007452 Daucus carota
Dinv15211 Davidia involucrata
Dinv20591 Davidia involucrata
Dinv38518 Davidia involucrata
Duzib205G0335 Durio zibethinus
ECA232G0018 Erigeron canadensis
EL10Ac7g17990 Beta vulgaris
Eucgr.K02783 Eucalyptus grandis
FAN04G2744 Fragaria x ananassa
FAN08G1614 Fragaria x ananassa
FAN13G1139 Fragaria x ananassa
FAN18G4510 Fragaria x ananassa
FvH4_5g06430 Fragaria vesca
Glyma.05G042400 Glycine max
Glyma.17G125100 Glycine max
Gohir.A07G056000 Gossypium hirsutum
Gohir.D07G060300 Gossypium hirsutum
Gorai.001G064000 Gossypium raimondii
GSVIVG01007621001 Vitis vinifera
HanXRQChr16g0504771 Helianthus annuus
Haze_07599 Corylus avellana
HPP92_006247 Vanilla planifolia
HPP92_006248 Vanilla planifolia
Hund05601 Selenicereus undatus
Lalb_Chr07g0183031 Lupinus albus
Lj4g0018547 Lotus japonicus
Lj5A131T30 Lonicera japonica
Lsat_1_v5_gn_4_79240 Lactuca sativa
Manes.06G111600 Manihot esculenta
Manes.14G059700 Manihot esculenta
Mapoly0102s0006 Marchantia polymorpha
MCO05G483 Micromonas commoda
MD06G1164800 Malus domestica
MD14G1170100 Malus domestica
Medtr4g104680 Medicago truncatula
MELO3C002307.2 Cucumis melo
Migut.O00172 Erythranthe guttata
Nitab4.5_0002522g0070 Nicotiana tabacum
Nitab4.5_0008037g0020 Nicotiana tabacum
Nn3g16677 Nelumbo nucifera
Nn4g22565 Nelumbo nucifera
Oeu019426.1 Olea europaea
Oeu036497.1 Olea europaea
Os12g0290150 Oryza sativa ssp. japonica
Peaxi162Scf00089g01235 Petunia axillaris
PGR044G1593 Punica granatum
PGSC0003DMG400018194 Solanum tuberosum
Phvul.003G202900 Phaseolus vulgaris
Phvul.010G094450 Phaseolus vulgaris
Potri.012G089500 Populus trichocarpa
Potri.015G085300 Populus trichocarpa
Pp3c19_15510 Physcomitrium patens
Pp3c22_13970 Physcomitrium patens
PRCOL_00006555 Prasinoderma coloniale
Prupe.5G164300 Prunus persica
Psat0s171g0040 Pisum sativum
Psat4g061760 Pisum sativum
Psat5g059720 Pisum sativum
Psat5g059840 Pisum sativum
Psat5g209640 Pisum sativum
Psat5g252720 Pisum sativum
Psat5g252760 Pisum sativum
PSO063G6548 Papaver somniferum
PSO754G0033 Papaver somniferum
QL10p006642 Quercus lobata
RcHm_v2.0_Chr5g0014091 Rosa chinensis
RcHm_v2.0_Chr7g0192351 Rosa chinensis
Rhsim12G0168600 Rhododendron simsii
Sabra15G0108200 Salix brachista
SalBow5G3182 Salvia bowleyana
SalBow5G4295 Salvia bowleyana
Sc04g0001370 Simmondsia chinensis
Sed0007484 Sechium edule
SEGI_19957 Sequoiadendron giganteum
SEGI_28653 Sequoiadendron giganteum
SEGI_39802 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30573 Striga asiatica
SGA_v2.0_scaffold90G27826 Striga asiatica
SMO367G0357 Selaginella moellendorffii
Solyc03g112060.3 Solanum lycopersicum
Sopen03g031160 Solanum pennellii
Sp6g12320 Schrenkiella parvula
TAR371G0697 Trochodendron aralioides
TAR629G3010 Trochodendron aralioides
THA.LOC104824992 Tarenaya hassleriana
Thecc.03G116400 Theobroma cacao
Thhalv10012812m.g Eutrema salsugineum
TPR.G37491 Trifolium pratense
TWI23G1317 Tripterygium wilfordii
TWI39G0950 Tripterygium wilfordii
unitig_8.g3068 Utricularia gibba
vmacro16649 Vaccinium macrocarpon
vmacro22879 Vaccinium macrocarpon
VMungo1215G0744 Vigna mungo
Zm00001eb130060 Zea mays

User provided reference genes

Program Settings