Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p32730 Brassica napus
A06p34830 Brassica napus
A09p06660 Brassica napus
Aa31LG11G3340 Aethionema arabicum
Aa31LG1G25220 Aethionema arabicum
Actinidia27091 Actinidia chinensis
Ah.07g202410 Amaranthus hybridus
AL4G42230 Arabidopsis lyrata
AL6G35420 Arabidopsis lyrata
Aqoxy1G03963 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60IJMX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCNH0L Arachis hypogaea
AT2G43480 Arabidopsis thaliana
AT5G24070 Arabidopsis thaliana
ATR0743G224 Amborella trichopoda
Atru.chr4.1297 Acer truncatum
AUR62002360 Chenopodium quinoa
AUR62023825 Chenopodium quinoa
BcaB04g19844 Brassica carinata
BcaB06g29315 Brassica carinata
BcaB06g29317 Brassica carinata
BcaC02g07176 Brassica carinata
BcaC04g23518 Brassica carinata
BcaNung01206 Brassica carinata
BcaNung01825 Brassica carinata
BolC4t28548H Brassica oleracea
BolC7t44896H Brassica oleracea
BolC9t53657H Brassica oleracea
BraA04t18737Z Brassica rapa
BraA06t26411Z Brassica rapa
BraA09t36312Z Brassica rapa
C04p70440 Brassica napus
C07p43670 Brassica napus
C09p07430 Brassica napus
CAN.G741.46 Capsicum annuum
CANSAT78G2444 Cannabis sativa
CARHR138570 Cardamine hirsuta
CARHR189520 Cardamine hirsuta
Carub.0004s2594 Capsella rubella
Carub.0006s2179 Capsella rubella
Ca_01242_v3 Cicer arietinum L.
Cc03_g12400 Coffea canephora
Cfa015207 Carpinus fangiana
Ciclev10024589m.g Citrus clementina
CiPaw.01G095100 Carya illinoinensis
ClCG06G001020 Citrullus lanatus
COL.COLO4_06573 Corchorus olitorius
Cpa.g.sc1040.1 Carica papaya
CsaV3_6G006890 Cucumis sativus L.
CSS0023120 Camellia sinensis var. sinensis
CSS0045531 Camellia sinensis var. sinensis
DCAR_028415 Daucus carota
Dinv05089 Davidia involucrata
Duzib212G0335 Durio zibethinus
ECA240G0427 Erigeron canadensis
ECA246G1861 Erigeron canadensis
ECA246G3313 Erigeron canadensis
EL10Ac3g06024 Beta vulgaris
Eucgr.A00042 Eucalyptus grandis
Eucgr.A00043 Eucalyptus grandis
Eucgr.A00045 Eucalyptus grandis
Eucgr.A00295 Eucalyptus grandis
Eucgr.A00296 Eucalyptus grandis
Eucgr.A00297 Eucalyptus grandis
Eucgr.A00298 Eucalyptus grandis
Eucgr.A00299 Eucalyptus grandis
Eucgr.A00301 Eucalyptus grandis
FAN11G2477 Fragaria x ananassa
FAN16G2945 Fragaria x ananassa
FAN21G2200 Fragaria x ananassa
FvH4_3g26850 Fragaria vesca
Glyma.13G346100 Glycine max
Glyma.15G028200 Glycine max
Gohir.A02G093200 Gossypium hirsutum
Gohir.D02G111300 Gossypium hirsutum
Gorai.005G126200 Gossypium raimondii
GSVIVG01004097001 Vitis vinifera
HanXRQChr10g0316261 Helianthus annuus
HanXRQChr13g0419601 Helianthus annuus
HanXRQChr14g0430791 Helianthus annuus
HanXRQChr17g0538871 Helianthus annuus
Haze_01429 Corylus avellana
Haze_01432 Corylus avellana
HPP92_012801 Vanilla planifolia
Lalb_Chr14g0372591 Lupinus albus
Lalb_Chr24g0396691 Lupinus albus
Lj3g0012546 Lotus japonicus
Lj6A108T20 Lonicera japonica
Lsat_1_v5_gn_0_45820 Lactuca sativa
Lsat_1_v5_gn_3_111280 Lactuca sativa
Lsat_1_v5_gn_3_27101 Lactuca sativa
Lsat_1_v5_gn_3_27121 Lactuca sativa
Manes.11G126600 Manihot esculenta
MBI07_g05955_MAGBIO Magnolia biondii
MD04G1046400 Malus domestica
Medtr2g099175 Medicago truncatula
MELO3C022435.2 Cucumis melo
Migut.N03091 Erythranthe guttata
Nitab4.5_0000242g0070 Nicotiana tabacum
Nitab4.5_0007875g0020 Nicotiana tabacum
Nn1g09567 Nelumbo nucifera
Oeu020490.1 Olea europaea
Peaxi162Scf00075g01616 Petunia axillaris
PGR083G2543 Punica granatum
PGSC0003DMG400005872 Solanum tuberosum
Phvul.005G154900 Phaseolus vulgaris
Potri.007G132800 Populus trichocarpa
Prupe.1G199900 Prunus persica
Psat5g290760 Pisum sativum
PSO210G0357 Papaver somniferum
PSO541G3822 Papaver somniferum
PSO832G4592 Papaver somniferum
QL10p051759 Quercus lobata
RcHm_v2.0_Chr4g0407891 Rosa chinensis
Sabra07G0107800 Salix brachista
Sabra07G0119600 Salix brachista
SalBow6G7066 Salvia bowleyana
Sc25g0002630 Simmondsia chinensis
Sed0027192 Sechium edule
SGA_v2.0_scaffold19G08824 Striga asiatica
Solyc08g013930.4 Solanum lycopersicum
Sopen08g004790 Solanum pennellii
Sp2g23250 Schrenkiella parvula
Sp4g25570 Schrenkiella parvula
TAR633G2767 Trochodendron aralioides
THA.LOC104803872 Tarenaya hassleriana
THA.LOC104818162 Tarenaya hassleriana
Thecc.04G172300 Theobroma cacao
Thhalv10001541m.g Eutrema salsugineum
Thhalv10004528m.g Eutrema salsugineum
TPR.G6510 Trifolium pratense
TWI38G1557 Tripterygium wilfordii
VMungo1080G1149 Vigna mungo

User provided reference genes

Program Settings