Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28470 Brassica napus
Aa31LG9G11310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1158 Anthoceros agrestis
Actinidia04166 Actinidia chinensis
Actinidia22199 Actinidia chinensis
Ah.07g197850 Amaranthus hybridus
AL6G44810 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.3PG13R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTN4Z3 Arachis hypogaea
AT4G10760 Arabidopsis thaliana
ATR0585G024 Amborella trichopoda
ATR0810G200 Amborella trichopoda
Atru.chr9.1907 Acer truncatum
AUR62007039 Chenopodium quinoa
AUR62019903 Chenopodium quinoa
BcaB01g01512 Brassica carinata
BcaC04g21070 Brassica carinata
BolC9t56443H Brassica oleracea
BraA09t38412Z Brassica rapa
C09p36040 Brassica napus
CAN.G1079.5 Capsicum annuum
CAN.G1079.6 Capsicum annuum
CAN.G1079.7 Capsicum annuum
CAN.G335.7 Capsicum annuum
CANSAT21G1656 Cannabis sativa
CARHR255850 Cardamine hirsuta
Carub.0006s2954 Capsella rubella
Ca_17312_v3 Cicer arietinum L.
CBR_g39884 Chara braunii
Cc00_g18480 Coffea canephora
Cc08_g16640 Coffea canephora
CDE04G1382 Ceratophyllum demersum
CDE07G1281 Ceratophyllum demersum
Cfa003981 Carpinus fangiana
Cfa011938 Carpinus fangiana
Ciclev10019070m.g Citrus clementina
CiPaw.12G078600 Carya illinoinensis
ClCG10G000860 Citrullus lanatus
COL.COLO4_10780 Corchorus olitorius
Cpa.g.sc1337.1 Carica papaya
Cre06.g288100 Chlamydomonas reinhardtii
Cre06.g295600 Chlamydomonas reinhardtii
CsaV3_3G000940 Cucumis sativus L.
CSS0005333 Camellia sinensis var. sinensis
CSS0012502 Camellia sinensis var. sinensis
DCAR_006533 Daucus carota
Dinv12007 Davidia involucrata
Duzib205G1547 Durio zibethinus
ECA246G3622 Erigeron canadensis
EL10Ac5g12455 Beta vulgaris
Eucgr.D01689 Eucalyptus grandis
FAN04G0556 Fragaria x ananassa
FAN08G2876 Fragaria x ananassa
FAN13G1348 Fragaria x ananassa
FAN18G1901 Fragaria x ananassa
FvH4_5g11050 Fragaria vesca
Glyma.07G067100 Glycine max
Glyma.16G033100 Glycine max
Gohir.A12G239300 Gossypium hirsutum
Gohir.D12G240500 Gossypium hirsutum
Gorai.008G257500 Gossypium raimondii
GSVIVG01019635001 Vitis vinifera
HanXRQChr17g0534781 Helianthus annuus
Haze_09149 Corylus avellana
Haze_26998 Corylus avellana
Haze_26999 Corylus avellana
Hma1.2p1_0440F.1_g153730 Hydrangea macrophylla
HPP92_007392 Vanilla planifolia
Lalb_Chr04g0259181 Lupinus albus
Lalb_Chr10g0096751 Lupinus albus
Lj3g0012917 Lotus japonicus
Lj8C201G21 Lonicera japonica
Lsat_1_v5_gn_3_13660 Lactuca sativa
Manes.02G004000 Manihot esculenta
Mapoly0036s0127 Marchantia polymorpha
MBI12_g03921_MAGBIO Magnolia biondii
MBI17_g40130_MAGBIO Magnolia biondii
MCO02G096 Micromonas commoda
MD06G1116900 Malus domestica
MD14G1124400 Malus domestica
Medtr2g099870 Medicago truncatula
Medtr4g025460 Medicago truncatula
Medtr8g104280 Medicago truncatula
MELO3C013781.2 Cucumis melo
Migut.I01141 Erythranthe guttata
MSTRG.12196 Avicennia marina
Nitab4.5_0000151g0390 Nicotiana tabacum
Nitab4.5_0000837g0110 Nicotiana tabacum
Nn3g18897 Nelumbo nucifera
Oeu010742.3 Olea europaea
Os02g0672600 Oryza sativa ssp. japonica
Peaxi162Scf00039g00141 Petunia axillaris
Peaxi162Scf00161g00018 Petunia axillaris
PGR031G2117 Punica granatum
PGSC0003DMG400004314 Solanum tuberosum
Phvul.010G102500 Phaseolus vulgaris
Potri.001G085200 Populus trichocarpa
Pp3c1_32590 Physcomitrium patens
Prupe.5G128200 Prunus persica
Psat7g010960 Pisum sativum
PSO063G0471 Papaver somniferum
PSO782G0762 Papaver somniferum
QL02p029127 Quercus lobata
RcHm_v2.0_Chr7g0186261 Rosa chinensis
RcHm_v2.0_Chr7g0186271 Rosa chinensis
RcHm_v2.0_Chr7g0186751 Rosa chinensis
Rhsim02G0251100 Rhododendron simsii
RhsimUnG0077100 Rhododendron simsii
Sabra01G0061800 Salix brachista
SalBow6G6472 Salvia bowleyana
Sc07g0010180 Simmondsia chinensis
Sed0010941 Sechium edule
Sed0014517 Sechium edule
SEGI_05717 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30268 Striga asiatica
SGA_v2.0_scaffold36G14279 Striga asiatica
SGA_v2.0_scaffold36G14280 Striga asiatica
SHI06892 Sapria himalayana
SHI06893 Sapria himalayana
SMO307G0078 Selaginella moellendorffii
Solyc08g066730.3 Solanum lycopersicum
Sopen08g020700 Solanum pennellii
Sp6g06740 Schrenkiella parvula
TAR375G0991 Trochodendron aralioides
THA.LOC104806452 Tarenaya hassleriana
Thecc.03G222800 Theobroma cacao
Thhalv10028481m.g Eutrema salsugineum
TPR.G32682 Trifolium pratense
TPR.G37954 Trifolium pratense
TWI60G1445 Tripterygium wilfordii
unitig_748.g7543 Utricularia gibba
vmacro11512 Vaccinium macrocarpon
VMungo0331G1577 Vigna mungo
Zm00001eb250310 Zea mays

User provided reference genes

Program Settings