Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00020 Brassica napus
Aa31LG1G14470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3206 Anthoceros agrestis
Actinidia28755 Actinidia chinensis
Ah.02g123200 Amaranthus hybridus
AL8G45690 Arabidopsis lyrata
Aqoxy6G02993 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2S25M9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8BHC3E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SH4Y7X Arachis hypogaea
AT5G65950 Arabidopsis thaliana
ATR0605G043 Amborella trichopoda
Atru.chr3.58 Acer truncatum
AUR62003719 Chenopodium quinoa
AUR62018030 Chenopodium quinoa
BcaNung06215 Brassica carinata
BolC3t21644H Brassica oleracea
BraA08t32059Z Brassica rapa
CAN.G1428.10 Capsicum annuum
CARHR281820 Cardamine hirsuta
Carub.0008s2857 Capsella rubella
Ca_22438_v3 Cicer arietinum L.
CBR_g20256 Chara braunii
CBR_g24120 Chara braunii
Cc04_g09170 Coffea canephora
Cc07_g12200 Coffea canephora
CDE06G1894 Ceratophyllum demersum
Cfa007111 Carpinus fangiana
Ciclev10026942m.g Citrus clementina
CiPaw.06G032800 Carya illinoinensis
ClCG01G020980 Citrullus lanatus
COL.COLO4_25046 Corchorus olitorius
Cpa.g.sc365.8 Carica papaya
Cpa.g.sc6.347 Carica papaya
Cre17.g729700 Chlamydomonas reinhardtii
CsaV3_6G047940 Cucumis sativus L.
DCAR_014120 Daucus carota
Dinv40218 Davidia involucrata
Duzib147G1500 Durio zibethinus
ECA232G3572 Erigeron canadensis
EL10Ac6g15029 Beta vulgaris
Eucgr.I02203 Eucalyptus grandis
FAN19G1634 Fragaria x ananassa
FAN23G1168 Fragaria x ananassa
FAN23G1414 Fragaria x ananassa
FAN26G2461 Fragaria x ananassa
FAN28G0094 Fragaria x ananassa
FvH4_1g10000 Fragaria vesca
Glyma.09G196100 Glycine max
Glyma.16G112900 Glycine max
Gohir.A07G172300 Gossypium hirsutum
Gohir.D07G179000 Gossypium hirsutum
Gorai.001G200200 Gossypium raimondii
GSVIVG01026446001 Vitis vinifera
HanXRQChr09g0259071 Helianthus annuus
Haze_03641 Corylus avellana
Hma1.2p1_0085F.1_g044360 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044370 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044380 Hydrangea macrophylla
HPP92_022739 Vanilla planifolia
Hund03583 Selenicereus undatus
Hund03584 Selenicereus undatus
Hund19685 Selenicereus undatus
Lalb_Chr09g0334491 Lupinus albus
Lalb_Chr16g0391711 Lupinus albus
Lj4A240G31 Lonicera japonica
Lj4C240T7 Lonicera japonica
Lj4g0003913 Lotus japonicus
Lsat_1_v5_gn_8_114080 Lactuca sativa
Manes.02G116600 Manihot esculenta
Manes.04G041334 Manihot esculenta
Manes.07G108212 Manihot esculenta
Manes.08G128711 Manihot esculenta
Mapoly0075s0041 Marchantia polymorpha
Mapoly0077s0054 Marchantia polymorpha
MBI04_g31209_MAGBIO Magnolia biondii
MCO16G661 Micromonas commoda
MD15G1228100 Malus domestica
Medtr3g103480 Medicago truncatula
Medtr4g115410 Medicago truncatula
Medtr5g016620 Medicago truncatula
Medtr8g072710 Medicago truncatula
MELO3C007982.2 Cucumis melo
Migut.D02574 Erythranthe guttata
Migut.D02599 Erythranthe guttata
MSTRG.18885 Avicennia marina
Nitab4.5_0000855g0090 Nicotiana tabacum
Nitab4.5_0011596g0010 Nicotiana tabacum
Nn6g31621 Nelumbo nucifera
Oeu021989.1 Olea europaea
Oeu041882.1 Olea europaea
Os02g0714500 Oryza sativa ssp. japonica
Peaxi162Scf00677g00223 Petunia axillaris
PGR119G1871 Punica granatum
PGSC0003DMG402013639 Solanum tuberosum
Phvul.003G271600 Phaseolus vulgaris
Potri.001G457201 Populus trichocarpa
Potri.011G144700 Populus trichocarpa
Pp3c17_22570 Physcomitrium patens
PRCOL_00004193 Prasinoderma coloniale
Prupe.7G186800 Prunus persica
Psat4g106360 Pisum sativum
PSO675G7053 Papaver somniferum
QL10p048872 Quercus lobata
RcHm_v2.0_Chr2g0096791 Rosa chinensis
Rhsim08G0025900 Rhododendron simsii
Sabra11G0129800 Salix brachista
SalBow2G0432 Salvia bowleyana
Sc03g0004130 Simmondsia chinensis
Sed0007865 Sechium edule
Sed0007938 Sechium edule
SEGI_01540 Sequoiadendron giganteum
SEGI_34852 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03353 Striga asiatica
SHI19208 Sapria himalayana
SMO144G0134 Selaginella moellendorffii
Solyc02g082280.3 Solanum lycopersicum
Sopen02g026940 Solanum pennellii
Sp2g30740 Schrenkiella parvula
TAR381G0142 Trochodendron aralioides
THA.LOC104819155 Tarenaya hassleriana
Thecc.01G002100 Theobroma cacao
Thhalv10003539m.g Eutrema salsugineum
TPR.G27924 Trifolium pratense
TPR.G4013 Trifolium pratense
TWI73G0718 Tripterygium wilfordii
unitig_746.g26634 Utricularia gibba
vmacro18477 Vaccinium macrocarpon
VMungo0251G2412 Vigna mungo
Zm00001eb055070 Zea mays
Zm00001eb188960 Zea mays
Zm00001eb252650 Zea mays
Zm00001eb339980 Zea mays
Zm00001eb425900 Zea mays

User provided reference genes

Program Settings