Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p67480 Brassica napus
A10p04060 Brassica napus
Aa31LG1G19340 Aethionema arabicum
Actinidia08871 Actinidia chinensis
Actinidia36806 Actinidia chinensis
Ah.02g114900 Amaranthus hybridus
AL1G15150 Arabidopsis lyrata
Aqoxy5G03378 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HDY6JH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YV4Q3G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z456W4 Arachis hypogaea
AT1G05350 Arabidopsis thaliana
ATR0561G152 Amborella trichopoda
Atru.chr6.1793 Acer truncatum
AUR62029613 Chenopodium quinoa
AUR62034824 Chenopodium quinoa
BcaC07g42135 Brassica carinata
BolC5t29145H Brassica oleracea
BolC8t52705H Brassica oleracea
BraA09t42076Z Brassica rapa
BraA10t42677Z Brassica rapa
C05p03680 Brassica napus
C08p51760 Brassica napus
CAN.G352.14 Capsicum annuum
CANSAT80G2043 Cannabis sativa
CANSAT80G2253 Cannabis sativa
CARHR004850 Cardamine hirsuta
Carub.0001s0469 Capsella rubella
Ca_16046_v3 Cicer arietinum L.
Cc03_g15140 Coffea canephora
CDE02G1207 Ceratophyllum demersum
Cfa018795 Carpinus fangiana
Ciclev10031478m.g Citrus clementina
CiPaw.12G043200 Carya illinoinensis
ClCG03G003760 Citrullus lanatus
COL.COLO4_28129 Corchorus olitorius
Cpa.g.sc13.116 Carica papaya
Cre13.g582350 Chlamydomonas reinhardtii
CsaV3_1G009650 Cucumis sativus L.
CSS0003528 Camellia sinensis var. sinensis
DCAR_021619 Daucus carota
Dinv11172 Davidia involucrata
Duzib205G1080 Durio zibethinus
EL10Ac5g11413 Beta vulgaris
Eucgr.K02726 Eucalyptus grandis
FAN04G2747 Fragaria x ananassa
FAN08G2192 Fragaria x ananassa
FAN13G1806 Fragaria x ananassa
FAN18G2263 Fragaria x ananassa
FvH4_5g08320 Fragaria vesca
Glyma.05G048200 Glycine max
Glyma.17G130200 Glycine max
Gohir.A12G189600 Gossypium hirsutum
Gohir.D07G055650 Gossypium hirsutum
Gohir.D12G192000 Gossypium hirsutum
Gorai.008G206300 Gossypium raimondii
GSVIVG01008543001 Vitis vinifera
HanXRQChr05g0155041 Helianthus annuus
Haze_07138 Corylus avellana
Haze_26394 Corylus avellana
HPP92_007005 Vanilla planifolia
Hund02441 Selenicereus undatus
Lalb_Chr08g0237161 Lupinus albus
Lj1g0005507 Lotus japonicus
Lj5A96T53 Lonicera japonica
Lj9A479G53 Lonicera japonica
Lsat_1_v5_gn_5_13720 Lactuca sativa
Manes.06G119600 Manihot esculenta
Mapoly0009s0069 Marchantia polymorpha
MBI02_g25788_MAGBIO Magnolia biondii
MBI03_g39999_MAGBIO Magnolia biondii
MBI11_g14654_MAGBIO Magnolia biondii
MBI11_g20141_MAGBIO Magnolia biondii
MBI14_g28171_MAGBIO Magnolia biondii
MBI14_g35559_MAGBIO Magnolia biondii
MBI15_g46740_MAGBIO Magnolia biondii
MBI16_g07739_MAGBIO Magnolia biondii
MBI18_g10957_MAGBIO Magnolia biondii
MBI18_g24959_MAGBIO Magnolia biondii
MBI19_g21294_MAGBIO Magnolia biondii
MD06G1141900 Malus domestica
MD14G1157100 Malus domestica
Medtr2g045230 Medicago truncatula
Medtr3g099240 Medicago truncatula
MELO3C002361.2 Cucumis melo
Migut.E01431 Erythranthe guttata
MSTRG.1619 Avicennia marina
Nitab4.5_0003282g0110 Nicotiana tabacum
Nitab4.5_0004750g0050 Nicotiana tabacum
Nn4g22317 Nelumbo nucifera
Oeu008767.2 Olea europaea
Oeu032516.1 Olea europaea
Os02g0506500 Oryza sativa ssp. japonica
Peaxi162Scf00089g00624 Petunia axillaris
PGR044G2394 Punica granatum
PGSC0003DMG401015240 Solanum tuberosum
Phvul.003G211200 Phaseolus vulgaris
Potri.012G097700 Populus trichocarpa
Potri.015G096300 Populus trichocarpa
Pp3c7_23140 Physcomitrium patens
PRCOL_00005996 Prasinoderma coloniale
Prupe.5G151100 Prunus persica
Psat5g051280 Pisum sativum
PSO017G2963 Papaver somniferum
PSO478G4249 Papaver somniferum
QL10p002899 Quercus lobata
RcHm_v2.0_Chr4g0427301 Rosa chinensis
RcHm_v2.0_Chr6g0288011 Rosa chinensis
RcHm_v2.0_Chr7g0190201 Rosa chinensis
Sabra15G0117100 Salix brachista
SalBow8G5593 Salvia bowleyana
Sc10g0010470 Simmondsia chinensis
Sed0010085 Sechium edule
SEGI_16442 Sequoiadendron giganteum
SEGI_18672 Sequoiadendron giganteum
SEGI_30811 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33024 Striga asiatica
SMO364G0767 Selaginella moellendorffii
Solyc03g111340.4 Solanum lycopersicum
Sopen03g030470 Solanum pennellii
Sp1g04220 Schrenkiella parvula
TAR374G1541 Trochodendron aralioides
TAR376G0865 Trochodendron aralioides
TAR622G1220 Trochodendron aralioides
THA.LOC104811587 Tarenaya hassleriana
Thecc.03G129200 Theobroma cacao
Thhalv10007699m.g Eutrema salsugineum
TPR.G14208 Trifolium pratense
TWI23G0550 Tripterygium wilfordii
TWI39G0081 Tripterygium wilfordii
unitig_46.g18225 Utricularia gibba
vmacro16716 Vaccinium macrocarpon
VMungo1215G0762 Vigna mungo
Zm00001eb241690 Zea mays

User provided reference genes

Program Settings