Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40280 Brassica napus
Aa31LG2G4330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.375 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis
Actinidia06086 Actinidia chinensis
AL5G36280 Arabidopsis lyrata
Aqoxy3G00678 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea
AT3G55160 Arabidopsis thaliana
ATR0564G261 Amborella trichopoda
Atru.chr8.140 Acer truncatum
AUR62034394 Chenopodium quinoa
AUR62039819 Chenopodium quinoa
BcaC06g33649 Brassica carinata
BcaC06g33650 Brassica carinata
BcaNung05131 Brassica carinata
BolC7t44300H Brassica oleracea
BraA06t26946Z Brassica rapa
C07p37790 Brassica napus
CAN.G1205.1 Capsicum annuum
CAN.G284.10 Capsicum annuum
CAN.G352.19 Capsicum annuum
CAN.G385.2 Capsicum annuum
CAN.G525.35 Capsicum annuum
CAN.G65.185 Capsicum annuum
CAN.G691.2 Capsicum annuum
CAN.G697.12 Capsicum annuum
CAN.G853.24 Capsicum annuum
CARHR159400 Cardamine hirsuta
CARHR165190 Cardamine hirsuta
Carub.0005s2180 Capsella rubella
Ca_04277_v3 Cicer arietinum L.
CBR_g50021 Chara braunii
Cc07_g03290 Coffea canephora
CDE09G0909 Ceratophyllum demersum
CDE09G1403 Ceratophyllum demersum
Cfa007537 Carpinus fangiana
Ciclev10010889m.g Citrus clementina
CiPaw.03G027900 Carya illinoinensis
ClCG10G014980 Citrullus lanatus
COL.COLO4_33291 Corchorus olitorius
Cpa.g.sc14.10 Carica papaya
Cpa.g.sc14.9 Carica papaya
Cre15.g642050 Chlamydomonas reinhardtii
CsaV3_3G041530 Cucumis sativus L.
CsaV3_3G041540 Cucumis sativus L.
CsaV3_UNG114880 Cucumis sativus L.
CSS0009890 Camellia sinensis var. sinensis
CSS0043134 Camellia sinensis var. sinensis
DCAR_021658 Daucus carota
Dinv33748 Davidia involucrata
Duzib147G0034 Durio zibethinus
Duzib147G0404 Durio zibethinus
ECA246G0262 Erigeron canadensis
EL10Ac2g02971 Beta vulgaris
Eucgr.J01361 Eucalyptus grandis
FAN02G0556 Fragaria x ananassa
FAN09G1953 Fragaria x ananassa
FvH4_6g48870 Fragaria vesca
Glyma.19G021700 Glycine max
Gohir.A09G017100 Gossypium hirsutum
Gohir.A11G290200 Gossypium hirsutum
Gohir.D09G015800 Gossypium hirsutum
Gohir.D09G015833 Gossypium hirsutum
Gorai.006G018000 Gossypium raimondii
GSVIVG01011388001 Vitis vinifera
HanXRQChr14g0439111 Helianthus annuus
Haze_14549 Corylus avellana
HPP92_011243 Vanilla planifolia
Hund15611 Selenicereus undatus
Lalb_Chr06g0175391 Lupinus albus
Lj2g0006836 Lotus japonicus
Lj2g0022018 Lotus japonicus
Lju41A18T48 Lonicera japonica
Lju41C18T12 Lonicera japonica
Lsat_1_v5_gn_3_100801 Lactuca sativa
Manes.15G175000 Manihot esculenta
Mapoly0207s0007 Marchantia polymorpha
MBI05_g35450_MAGBIO Magnolia biondii
MCO11G207 Micromonas commoda
MD09G1049900 Malus domestica
MD17G1050300 Malus domestica
Medtr6g011760 Medicago truncatula
MELO3C009878.2 Cucumis melo
Migut.H00912 Erythranthe guttata
Migut.L00530 Erythranthe guttata
MSTRG.3234 Avicennia marina
Nitab4.5_0002923g0020 Nicotiana tabacum
Nn4g23132 Nelumbo nucifera
Oeu060938.1 Olea europaea
Os08g0169700 Oryza sativa ssp. japonica
Peaxi162Scf00451g00821 Petunia axillaris
PGR083G2853 Punica granatum
Phvul.004G028000 Phaseolus vulgaris
Potri.004G128601 Populus trichocarpa
Pp3c6_28730 Physcomitrium patens
Prupe.3G268800 Prunus persica
Psat1g074560 Pisum sativum
PSO017G1620 Papaver somniferum
QL02p081653 Quercus lobata
RcHm_v2.0_Chr2g0168711 Rosa chinensis
Rhsim10G0040100 Rhododendron simsii
Sabra04G0090500 Salix brachista
Sc14g0005950 Simmondsia chinensis
Sed0005323 Sechium edule
SEGI_38380 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00328 Striga asiatica
SMO367G0809 Selaginella moellendorffii
Solyc03g062650.3 Solanum lycopersicum
Sopen03g014980 Solanum pennellii
Sp2g17500 Schrenkiella parvula
TAR374G0083 Trochodendron aralioides
THA.LOC104823176 Tarenaya hassleriana
Thecc.04G080100 Theobroma cacao
Thecc.08G172300 Theobroma cacao
Thhalv10003503m.g Eutrema salsugineum
TPR.G10375 Trifolium pratense
TWI34G0228 Tripterygium wilfordii
unitig_0.g531 Utricularia gibba
vmacro05484 Vaccinium macrocarpon
vmacro05485 Vaccinium macrocarpon
vmacro05704 Vaccinium macrocarpon
vmacro05746 Vaccinium macrocarpon
vmacro17103 Vaccinium macrocarpon
vmacro22549 Vaccinium macrocarpon
VMungo0331G1774 Vigna mungo
VMungo0464G0208 Vigna mungo
VMungo0464G0495 Vigna mungo
VMungo1127G1036 Vigna mungo
VMungo1127G1975 Vigna mungo
Zm00001eb414960 Zea mays

User provided reference genes

Program Settings