Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39790 Brassica napus
Aa31LG3G1580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis
Actinidia01118 Actinidia chinensis
Actinidia01119 Actinidia chinensis
Actinidia05342 Actinidia chinensis
Ah.07g199780 Amaranthus hybridus
Ah.12g060060 Amaranthus hybridus
AL3G20110 Arabidopsis lyrata
Aqoxy1G00701 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea
AT3G09050 Arabidopsis thaliana
ATR0618G104 Amborella trichopoda
ATR0618G115 Amborella trichopoda
Atru.chr8.2203 Acer truncatum
AUR62025814 Chenopodium quinoa
AUR62042946 Chenopodium quinoa
BcaC05g29639 Brassica carinata
BcaC09g48005 Brassica carinata
BcaC09g48006 Brassica carinata
BcaC09g48050 Brassica carinata
BolC1t05477H Brassica oleracea
BolC5t34535H Brassica oleracea
BraA01t04319Z Brassica rapa
BraA05t22763Z Brassica rapa
C05p58830 Brassica napus
CAN.G1297.4 Capsicum annuum
CAN.G338.58 Capsicum annuum
CANSAT35G0638 Cannabis sativa
CARHR083410 Cardamine hirsuta
Carub.0003s0821 Capsella rubella
Ca_07614_v3 Cicer arietinum L.
Cc06_g01630 Coffea canephora
CDE03G0505 Ceratophyllum demersum
Ciclev10012537m.g Citrus clementina
CiPaw.09G206400 Carya illinoinensis
ClCG04G007220 Citrullus lanatus
COL.COLO4_14593 Corchorus olitorius
Cpa.g.sc56.117 Carica papaya
CsaV3_4G026010 Cucumis sativus L.
CSS0007949 Camellia sinensis var. sinensis
CSS0025068 Camellia sinensis var. sinensis
DCAR_015452 Daucus carota
Dinv14530 Davidia involucrata
Dinv35509 Davidia involucrata
Dinv37082 Davidia involucrata
Duzib128G1899 Durio zibethinus
ECA247G0127 Erigeron canadensis
ECA247G1841 Erigeron canadensis
EL10Ac6g13875 Beta vulgaris
Eucgr.B02792 Eucalyptus grandis
FAN02G1355 Fragaria x ananassa
FAN09G2814 Fragaria x ananassa
FAN14G3518 Fragaria x ananassa
FvH4_6g11980 Fragaria vesca
Glyma.03G077300 Glycine max
Glyma.07G145800 Glycine max
Glyma.18G197300 Glycine max
Gohir.A01G225500 Gossypium hirsutum
Gohir.D01G215200 Gossypium hirsutum
Gorai.002G261300 Gossypium raimondii
HanXRQChr10g0287001 Helianthus annuus
Haze_20956 Corylus avellana
Hund02698 Selenicereus undatus
Lalb_Chr03g0043011 Lupinus albus
Lalb_Chr07g0193301 Lupinus albus
Lj1g0011685 Lotus japonicus
Lj2C80T14 Lonicera japonica
Lj2P1203T18 Lonicera japonica
Lj3g0009346 Lotus japonicus
Lsat_1_v5_gn_9_36061 Lactuca sativa
Manes.09G102400 Manihot esculenta
Mapoly0004s0086 Marchantia polymorpha
Mapoly0010s0127 Marchantia polymorpha
MD04G1147400 Malus domestica
Medtr4g015010 Medicago truncatula
Medtr7g067000 Medicago truncatula
MELO3C003227.2 Cucumis melo
Migut.J00221 Erythranthe guttata
MSTRG.5595 Avicennia marina
Nitab4.5_0000008g0810 Nicotiana tabacum
Nitab4.5_0000652g0170 Nicotiana tabacum
Nitab4.5_0001837g0050 Nicotiana tabacum
Nitab4.5_0004912g0060 Nicotiana tabacum
Nn2g11373 Nelumbo nucifera
Nn2g13608 Nelumbo nucifera
Os01g0853000 Oryza sativa ssp. japonica
Peaxi162Scf00009g01923 Petunia axillaris
Peaxi162Scf00141g00718 Petunia axillaris
PGR031G2542 Punica granatum
PGSC0003DMG400011090 Solanum tuberosum
PGSC0003DMG400020319 Solanum tuberosum
Phvul.008G107300 Phaseolus vulgaris
Phvul.010G008600 Phaseolus vulgaris
Potri.006G096700 Populus trichocarpa
Pp3c20_9600 Physcomitrium patens
Pp3c23_6870 Physcomitrium patens
Pp3c5_19930 Physcomitrium patens
Psat3g131120 Pisum sativum
Psat7g247600 Pisum sativum
PSO339G5866 Papaver somniferum
PSO384G0902 Papaver somniferum
RcHm_v2.0_Chr3g0463811 Rosa chinensis
Sabra06G0074300 Salix brachista
Sc01g0006840 Simmondsia chinensis
Sed0005881 Sechium edule
SEGI_17473 Sequoiadendron giganteum
SEGI_22580 Sequoiadendron giganteum
SEGI_33363 Sequoiadendron giganteum
SGA_v2.0_scaffold1443G53951 Striga asiatica
SGA_v2.0_scaffold85G26760 Striga asiatica
Solyc09g014215.2 Solanum lycopersicum
Solyc10g085080.3 Solanum lycopersicum
Sopen09g007090 Solanum pennellii
Sopen10g034540 Solanum pennellii
Sp3g07500 Schrenkiella parvula
TAR623G0986 Trochodendron aralioides
TAR633G2503 Trochodendron aralioides
THA.LOC104816219 Tarenaya hassleriana
Thecc.05G021700 Theobroma cacao
Thhalv10021354m.g Eutrema salsugineum
TPR.G1580 Trifolium pratense
TPR.G5230 Trifolium pratense
TWI74G1551 Tripterygium wilfordii
unitig_578.g15896 Utricularia gibba
vmacro08602 Vaccinium macrocarpon
VMungo0331G1214 Vigna mungo
VMungo1383G0141 Vigna mungo
Zm00001eb367320 Zea mays

User provided reference genes

Program Settings