Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39520 Brassica napus
A09p04250 Brassica napus
Aa31LG2G4940 Aethionema arabicum
Aa31LG3G14110 Aethionema arabicum
Actinidia29405 Actinidia chinensis
Ah.05g178730 Amaranthus hybridus
AL8G19830 Arabidopsis lyrata
Aqoxy5G02631 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52ATST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1AFU7 Arachis hypogaea
AT5G47840 Arabidopsis thaliana
ATR1136G076 Amborella trichopoda
Atru.chr13.2333 Acer truncatum
AUR62004586 Chenopodium quinoa
AUR62023533 Chenopodium quinoa
BcaB04g19536 Brassica carinata
BcaC04g23805 Brassica carinata
BolC7t44394H Brassica oleracea
BolC9t53379H Brassica oleracea
BraA06t26867Z Brassica rapa
BraA09t36062Z Brassica rapa
C07p38750 Brassica napus
C09p04490 Brassica napus
CAN.G1647.6 Capsicum annuum
CAN.G195.9 Capsicum annuum
CANSAT25G2196 Cannabis sativa
CARHR184380 Cardamine hirsuta
Carub.0008s0733 Capsella rubella
Ca_19675_v3 Cicer arietinum L.
Ca_30990_v3 Cicer arietinum L.
Cc10_g11290 Coffea canephora
CDE05G1386 Ceratophyllum demersum
CDE05G3333 Ceratophyllum demersum
Cfa012981 Carpinus fangiana
Ciclev10021337m.g Citrus clementina
CiPaw.07G234600 Carya illinoinensis
ClCG08G008660 Citrullus lanatus
COL.COLO4_24600 Corchorus olitorius
Cpa.g.sc397.9 Carica papaya
Cpa.g.sc50.8 Carica papaya
Cre12.g494850 Chlamydomonas reinhardtii
CsaV3_6G004680 Cucumis sativus L.
CSS0028951 Camellia sinensis var. sinensis
CSS0049684 Camellia sinensis var. sinensis
DCAR_014387 Daucus carota
Dinv41783 Davidia involucrata
Duzib177G0274 Durio zibethinus
Duzib177G0286 Durio zibethinus
EL10Ac1g00150 Beta vulgaris
Eucgr.F02985 Eucalyptus grandis
FAN08G3308 Fragaria x ananassa
FAN18G0437 Fragaria x ananassa
FvH4_5g31400 Fragaria vesca
Glyma.09G234300 Glycine max
Gohir.A05G275600 Gossypium hirsutum
Gohir.D05G277700 Gossypium hirsutum
Gorai.009G290700 Gossypium raimondii
GSVIVG01026008001 Vitis vinifera
HanXRQChr02g0040571 Helianthus annuus
Haze_21345 Corylus avellana
Haze_21351 Corylus avellana
Hma1.2p1_0342F.1_g130690 Hydrangea macrophylla
HPP92_003741 Vanilla planifolia
HPP92_003780 Vanilla planifolia
HPP92_003856 Vanilla planifolia
Hund16768 Selenicereus undatus
Lalb_Chr01g0000151 Lupinus albus
Lj3g0019948 Lotus japonicus
Lj7C286G4 Lonicera japonica
Lsat_1_v5_gn_1_9700 Lactuca sativa
Manes.02G199500 Manihot esculenta
MBI03_g18681_MAGBIO Magnolia biondii
MCO07G664 Micromonas commoda
MD08G1217400 Malus domestica
MD15G1404700 Malus domestica
Medtr4g035170 Medicago truncatula
MELO3C019938.2 Cucumis melo
Migut.C01276 Erythranthe guttata
MSTRG.1532 Avicennia marina
MSTRG.25453 Avicennia marina
Nitab4.5_0000365g0110 Nicotiana tabacum
Nitab4.5_0001579g0020 Nicotiana tabacum
Nn5g27424 Nelumbo nucifera
Oeu000541.2 Olea europaea
Oeu064083.1 Olea europaea
Os08g0109300 Oryza sativa ssp. japonica
Peaxi162Scf00391g00320 Petunia axillaris
PGR042G3019 Punica granatum
PGSC0003DMG400013933 Solanum tuberosum
PGSC0003DMG400026110 Solanum tuberosum
Phvul.011G003000 Phaseolus vulgaris
Potri.006G189201 Populus trichocarpa
Potri.013G103400 Populus trichocarpa
Potri.019G078200 Populus trichocarpa
Pp3c27_6280 Physcomitrium patens
Pp3c6_20610 Physcomitrium patens
PRCOL_00003652 Prasinoderma coloniale
Prupe.1G556600 Prunus persica
Psat0s1799g0080 Pisum sativum
Psat7g192360 Pisum sativum
PSO017G6918 Papaver somniferum
PSO170G5208 Papaver somniferum
QL02p023752 Quercus lobata
RcHm_v2.0_Chr1g0329011 Rosa chinensis
RcHm_v2.0_Chr2g0147601 Rosa chinensis
RcHm_v2.0_Chr4g0434501 Rosa chinensis
RcHm_v2.0_Chr5g0017821 Rosa chinensis
RcHm_v2.0_Chr7g0223711 Rosa chinensis
RcHm_v2.0_Chr7g0226671 Rosa chinensis
Rhsim11G0052000 Rhododendron simsii
Rhsim11G0052100 Rhododendron simsii
Sabra13G0089500 Salix brachista
Sabra19G0089200 Salix brachista
Sc23g0001590 Simmondsia chinensis
Sed0016283 Sechium edule
Sed0025573 Sechium edule
SEGI_07636 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32543 Striga asiatica
SMO364G0753 Selaginella moellendorffii
Solyc06g065270.4 Solanum lycopersicum
Sopen06g023770 Solanum pennellii
Sopen11g010480 Solanum pennellii
Sp2g18340 Schrenkiella parvula
TAR628G0728 Trochodendron aralioides
TAR636G0058 Trochodendron aralioides
THA.LOC104807203 Tarenaya hassleriana
Thecc.08G173100 Theobroma cacao
Thhalv10004711m.g Eutrema salsugineum
Thhalv10004716m.g Eutrema salsugineum
TPR.G31920 Trifolium pratense
TWI14G1107 Tripterygium wilfordii
vmacro00741 Vaccinium macrocarpon
VMungo0720G1864 Vigna mungo
VMungo1127G0008 Vigna mungo
Zm00001eb260410 Zea mays

User provided reference genes

Program Settings