Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01730 Brassica napus
A10p25020 Brassica napus
Aa31LG3G14470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis
Actinidia22132 Actinidia chinensis
Actinidia30605 Actinidia chinensis
Ah.02g131140 Amaranthus hybridus
Ah.03g135760 Amaranthus hybridus
AL6G23800 Arabidopsis lyrata
Aqoxy3G01758 Aquilegia oxysepala
AT5G13190 Arabidopsis thaliana
ATR0582G064 Amborella trichopoda
Atru.chr11.2402 Acer truncatum
AUR62028865 Chenopodium quinoa
BcaB01g05369 Brassica carinata
BcaNung01169 Brassica carinata
BolC2t06540H Brassica oleracea
BolC9t59228H Brassica oleracea
BraA02t05152Z Brassica rapa
BraA10t44563Z Brassica rapa
C02p05970 Brassica napus
C09p63880 Brassica napus
CAN.G1277.4 Capsicum annuum
CANSAT56G2313 Cannabis sativa
CARHR200280 Cardamine hirsuta
Carub.0006s1136 Capsella rubella
Ca_06515_v3 Cicer arietinum L.
CBR_g4442 Chara braunii
Cc11_g17450 Coffea canephora
CDE05G1586 Ceratophyllum demersum
CDE05G2048 Ceratophyllum demersum
Cfa009412 Carpinus fangiana
Ciclev10033047m.g Citrus clementina
CiPaw.05G104000 Carya illinoinensis
CiPaw.06G107500 Carya illinoinensis
ClCG06G001820 Citrullus lanatus
COL.COLO4_34942 Corchorus olitorius
Cpa.g.sc123.51 Carica papaya
CsaV3_6G007860 Cucumis sativus L.
CSS0040217 Camellia sinensis var. sinensis
DCAR_028448 Daucus carota
Dinv06880 Davidia involucrata
Duzib052G1117 Durio zibethinus
Duzib248G0674 Durio zibethinus
ECA246G0794 Erigeron canadensis
EL10Ac6g13582 Beta vulgaris
Eucgr.B03544 Eucalyptus grandis
FAN07G2678 Fragaria x ananassa
FAN12G2387 Fragaria x ananassa
FAN17G2587 Fragaria x ananassa
FvH4_4g23080 Fragaria vesca
Glyma.08G360100 Glycine max
Glyma.18G301900 Glycine max
Gohir.A01G021300 Gossypium hirsutum
Gohir.A03G151200 Gossypium hirsutum
Gohir.A12G140500 Gossypium hirsutum
Gohir.D01G019700 Gossypium hirsutum
Gohir.D02G174200 Gossypium hirsutum
Gohir.D12G145100 Gossypium hirsutum
Gorai.002G022100 Gossypium raimondii
Gorai.005G195900 Gossypium raimondii
Gorai.008G156500 Gossypium raimondii
GSVIVG01000954001 Vitis vinifera
HanXRQChr06g0175181 Helianthus annuus
HanXRQChr17g0540491 Helianthus annuus
Haze_12470 Corylus avellana
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla
HPP92_011548 Vanilla planifolia
Hund25495 Selenicereus undatus
Hund28220 Selenicereus undatus
Hund28225 Selenicereus undatus
Lj1g0020005 Lotus japonicus
Lj3A1076T34 Lonicera japonica
Lsat_1_v5_gn_6_34980 Lactuca sativa
Manes.08G103200 Manihot esculenta
Manes.09G185800 Manihot esculenta
MBI07_g37483_MAGBIO Magnolia biondii
MD13G1126300 Malus domestica
MD16G1126800 Malus domestica
Medtr7g005440 Medicago truncatula
MELO3C022346.2 Cucumis melo
Migut.K01033 Erythranthe guttata
MSTRG.469 Avicennia marina
Nitab4.5_0001600g0070 Nicotiana tabacum
Nn3g16327 Nelumbo nucifera
Oeu003281.1 Olea europaea
Oeu039177.1 Olea europaea
Os02g0515600 Oryza sativa ssp. japonica
Peaxi162Scf00220g00119 Petunia axillaris
PGSC0003DMG400030010 Solanum tuberosum
Phvul.008G000500 Phaseolus vulgaris
Potri.001G061900 Populus trichocarpa
Potri.003G165900 Populus trichocarpa
Pp3c26_1170 Physcomitrium patens
Prupe.1G219100 Prunus persica
Psat3g208320 Pisum sativum
PSO017G1114 Papaver somniferum
PSO478G3672 Papaver somniferum
QL03p050357 Quercus lobata
RcHm_v2.0_Chr1g0337501 Rosa chinensis
RcHm_v2.0_Chr4g0404941 Rosa chinensis
RcHm_v2.0_Chr4g0429351 Rosa chinensis
RcHm_v2.0_Chr5g0057011 Rosa chinensis
Rhsim12G0021000 Rhododendron simsii
Sabra03G0121100 Salix brachista
SalBow2G1516 Salvia bowleyana
SalBow8G3396 Salvia bowleyana
SalBow8G4168 Salvia bowleyana
Sc04g0010460 Simmondsia chinensis
Sed0021477 Sechium edule
SEGI_11247 Sequoiadendron giganteum
SEGI_11753 Sequoiadendron giganteum
SEGI_18844 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25945 Striga asiatica
SMO271G0002 Selaginella moellendorffii
Solyc01g009780.3 Solanum lycopersicum
Sopen01g005330 Solanum pennellii
Sp6g30790 Schrenkiella parvula
TAR371G0765 Trochodendron aralioides
TAR622G0886 Trochodendron aralioides
TAR623G1654 Trochodendron aralioides
TAR629G0377 Trochodendron aralioides
TAR629G2749 Trochodendron aralioides
THA.LOC104825475 Tarenaya hassleriana
Thecc.02G196400 Theobroma cacao
Thhalv10014995m.g Eutrema salsugineum
TPR.G15629 Trifolium pratense
TWI18G0823 Tripterygium wilfordii
TWI75G1796 Tripterygium wilfordii
unitig_8.g3121 Utricularia gibba
vmacro22631 Vaccinium macrocarpon
VMungo1383G2546 Vigna mungo
Zm00001eb241880 Zea mays

User provided reference genes

Program Settings