Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00330 Brassica napus
Aa31LG1G28940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis
Actinidia21044 Actinidia chinensis
Actinidia21045 Actinidia chinensis
Actinidia24820 Actinidia chinensis
Actinidia26720 Actinidia chinensis
Ah.08g213420 Amaranthus hybridus
AL4G47180 Arabidopsis lyrata
Aqoxy2G02938 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea
AT2G47600 Arabidopsis thaliana
ATR0706G014 Amborella trichopoda
ATR0706G260 Amborella trichopoda
Atru.chr5.1142 Acer truncatum
AUR62008667 Chenopodium quinoa
AUR62025577 Chenopodium quinoa
BcaB02g08759 Brassica carinata
BcaC02g12599 Brassica carinata
BolC4t21668H Brassica oleracea
BraA05t19031Z Brassica rapa
C04p00250 Brassica napus
CAN.G1280.3 Capsicum annuum
CAN.G1989.8 Capsicum annuum
CANSAT25G1370 Cannabis sativa
CARHR143000 Cardamine hirsuta
Carub.0004s3033 Capsella rubella
Ca_10331_v3 Cicer arietinum L.
CBR_g22437 Chara braunii
Cc01_g20880 Coffea canephora
CDE02G2026 Ceratophyllum demersum
Cfa005908 Carpinus fangiana
Ciclev10019600m.g Citrus clementina
CiPaw.08G094900 Carya illinoinensis
ClCG10G010970 Citrullus lanatus
COL.COLO4_23341 Corchorus olitorius
Cpa.g.sc9.258 Carica papaya
Cre11.g479600 Chlamydomonas reinhardtii
CsaV3_4G000840 Cucumis sativus L.
CSS0024650 Camellia sinensis var. sinensis
DCAR_005790 Daucus carota
Dinv19686 Davidia involucrata
Duzib138G1616 Durio zibethinus
ECA248G2514 Erigeron canadensis
EL10Ac3g06395 Beta vulgaris
EL10Ac7g17510 Beta vulgaris
Eucgr.K03487 Eucalyptus grandis
Eucgr.K03488 Eucalyptus grandis
FAN15G2676 Fragaria x ananassa
FAN20G0637 Fragaria x ananassa
FAN24G1083 Fragaria x ananassa
FAN27G1322 Fragaria x ananassa
FvH4_2g25770 Fragaria vesca
Glyma.02G017550 Glycine max
Glyma.10G018000 Glycine max
Gohir.A11G114301 Gossypium hirsutum
Gohir.D11G119400 Gossypium hirsutum
Gorai.007G127900 Gossypium raimondii
GSVIVG01028023001 Vitis vinifera
HanXRQChr13g0413001 Helianthus annuus
Haze_04942 Corylus avellana
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla
HPP92_016082 Vanilla planifolia
Hund18172 Selenicereus undatus
Hund18173 Selenicereus undatus
Lalb_Chr06g0166491 Lupinus albus
Lj2A1195G24 Lonicera japonica
Lj5g0015401 Lotus japonicus
Lsat_1_v5_gn_5_191280 Lactuca sativa
Manes.01G219600 Manihot esculenta
Mapoly0134s0038 Marchantia polymorpha
MBI18_g06031_MAGBIO Magnolia biondii
MD03G1288600 Malus domestica
Medtr1g088430 Medicago truncatula
Medtr3g062620 Medicago truncatula
Medtr7g112660 Medicago truncatula
MELO3C017953.2 Cucumis melo
Migut.D00150 Erythranthe guttata
Migut.N01507 Erythranthe guttata
Migut.O00421 Erythranthe guttata
Nitab4.5_0001879g0130 Nicotiana tabacum
Nitab4.5_0002433g0030 Nicotiana tabacum
Nitab4.5_0002433g0040 Nicotiana tabacum
Nitab4.5_0002470g0070 Nicotiana tabacum
Nitab4.5_0005805g0040 Nicotiana tabacum
Nn4g25787 Nelumbo nucifera
Oeu046676.1 Olea europaea
Os02g0644900 Oryza sativa ssp. japonica
Os11g0660000 Oryza sativa ssp. japonica
Peaxi162Scf00001g04234 Petunia axillaris
Peaxi162Scf00399g00716 Petunia axillaris
PGR044G1461 Punica granatum
Phvul.007G147000 Phaseolus vulgaris
Potri.014G128600 Populus trichocarpa
Pp3c1_39250 Physcomitrium patens
Pp3c2_6060 Physcomitrium patens
PRCOL_00004461 Prasinoderma coloniale
Prupe.8G261900 Prunus persica
Psat6g165240 Pisum sativum
PSO170G2277 Papaver somniferum
PSO407G0387 Papaver somniferum
QL12p028420 Quercus lobata
RcHm_v2.0_Chr6g0294071 Rosa chinensis
RcHm_v2.0_Chr6g0294081 Rosa chinensis
Rhsim01G0285500 Rhododendron simsii
Rhsim05G0173900 Rhododendron simsii
Sabra14G0095500 Salix brachista
SalBow2G1764 Salvia bowleyana
SalBow3G4402 Salvia bowleyana
Sc05g0003780 Simmondsia chinensis
Sc05g0003820 Simmondsia chinensis
Sed0000130 Sechium edule
SEGI_13510 Sequoiadendron giganteum
SEGI_24798 Sequoiadendron giganteum
SEGI_31813 Sequoiadendron giganteum
SEGI_40223 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41143 Striga asiatica
SGA_v2.0_scaffold1G00362 Striga asiatica
SMO351G0556 Selaginella moellendorffii
Solyc06g009130.3 Solanum lycopersicum
Sopen06g003890 Solanum pennellii
TAR362G0334 Trochodendron aralioides
THA.LOC104798829 Tarenaya hassleriana
THA.LOC104817489 Tarenaya hassleriana
THA.LOC104827666 Tarenaya hassleriana
Thecc.01G301000 Theobroma cacao
Thhalv10001391m.g Eutrema salsugineum
TPR.G33974 Trifolium pratense
TWI59G0198 Tripterygium wilfordii
vmacro15016 Vaccinium macrocarpon
VMungo0720G3165 Vigna mungo
Zm00001eb165450 Zea mays
Zm00001eb407450 Zea mays

User provided reference genes

Program Settings