Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40410 Brassica napus
Aa31LG2G4530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis
Actinidia19605 Actinidia chinensis
Actinidia29649 Actinidia chinensis
Ah.00g000110 Amaranthus hybridus
AL5G18300 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea
AT3G28670 Arabidopsis thaliana
ATR0144G003 Amborella trichopoda
ATR0800G070 Amborella trichopoda
Atru.chr13.942 Acer truncatum
AUR62035419 Chenopodium quinoa
AUR62035705 Chenopodium quinoa
AUR62035707 Chenopodium quinoa
BcaB04g19478 Brassica carinata
BcaC01g02218 Brassica carinata
BcaC06g30902 Brassica carinata
BcaC06g33632 Brassica carinata
BolC5t31933H Brassica oleracea
BolC7t44279H Brassica oleracea
BraA06t26959Z Brassica rapa
C05p32060 Brassica napus
C07p37630 Brassica napus
CAN.G1751.8 Capsicum annuum
CAN.G1921.11 Capsicum annuum
CANSAT21G2028 Cannabis sativa
CARHR286650 Cardamine hirsuta
Carub.0005s0719 Capsella rubella
Ca_15541_v3 Cicer arietinum L.
CBR_g38241 Chara braunii
Cc10_g08220 Coffea canephora
CDE07G0720 Ceratophyllum demersum
Ciclev10000979m.g Citrus clementina
CiPaw.07G161600 Carya illinoinensis
CiPaw.08G058000 Carya illinoinensis
ClCG11G014800 Citrullus lanatus
COL.COLO4_23153 Corchorus olitorius
COL.COLO4_35322 Corchorus olitorius
Cpa.g.sc177.3 Carica papaya
Cre12.g551000 Chlamydomonas reinhardtii
CsaV3_3G048210 Cucumis sativus L.
CSS0009932 Camellia sinensis var. sinensis
DCAR_014675 Daucus carota
Dinv44886 Davidia involucrata
Duzib041G0544 Durio zibethinus
Duzib093G1837 Durio zibethinus
Duzib116G0315 Durio zibethinus
ECA240G4523 Erigeron canadensis
EL10Ac1g02246 Beta vulgaris
Eucgr.F02170 Eucalyptus grandis
FAN08G1402 Fragaria x ananassa
FAN18G0583 Fragaria x ananassa
FAN18G4360 Fragaria x ananassa
FvH4_5g33860 Fragaria vesca
Glyma.04G090400 Glycine max
Glyma.06G092200 Glycine max
Gohir.A05G217800 Gossypium hirsutum
Gohir.D05G219700 Gossypium hirsutum
Gorai.009G226700 Gossypium raimondii
GSVIVG01009231001 Vitis vinifera
HanXRQChr03g0065451 Helianthus annuus
HanXRQChr16g0499811 Helianthus annuus
Haze_22505 Corylus avellana
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla
HPP92_020868 Vanilla planifolia
HPP92_028121 Vanilla planifolia
Hund05222 Selenicereus undatus
Hund16029 Selenicereus undatus
Lalb_Chr11g0064791 Lupinus albus
Lj1g0010479 Lotus japonicus
Lju170A15T23 Lonicera japonica
Lju170A15T24 Lonicera japonica
Lju279A4T8 Lonicera japonica
Lju279C4T1 Lonicera japonica
Lsat_1_v5_gn_7_55820 Lactuca sativa
Manes.05G187400 Manihot esculenta
Manes.18G055200 Manihot esculenta
Mapoly0053s0027 Marchantia polymorpha
MBI16_g44752_MAGBIO Magnolia biondii
MD08G1208600 Malus domestica
MD15G1392600 Malus domestica
Medtr3g111330 Medicago truncatula
MELO3C003498.2 Cucumis melo
Migut.C00296 Erythranthe guttata
MSTRG.25002 Avicennia marina
Nitab4.5_0000681g0030 Nicotiana tabacum
Nitab4.5_0001608g0030 Nicotiana tabacum
Nn1g05685 Nelumbo nucifera
Oeu035375.1 Olea europaea
Oeu035376.1 Olea europaea
Os08g0101400 Oryza sativa ssp. japonica
Os10g0188900 Oryza sativa ssp. japonica
Peaxi162Scf01397g00010 Petunia axillaris
Peaxi162Scf01397g00011 Petunia axillaris
PGR031G2819 Punica granatum
PGSC0003DMG400019007 Solanum tuberosum
PGSC0003DMG400019103 Solanum tuberosum
Phvul.009G145500 Phaseolus vulgaris
Potri.002G108700 Populus trichocarpa
Pp3c26_6510 Physcomitrium patens
Pp3c4_19380 Physcomitrium patens
Prupe.1G540100 Prunus persica
Psat5g018640 Pisum sativum
PSO700G0171 Papaver somniferum
PSO761G0268 Papaver somniferum
QL12p040011 Quercus lobata
RcHm_v2.0_Chr7g0233191 Rosa chinensis
Rhsim07G0214600 Rhododendron simsii
Sabra02G0085500 Salix brachista
SalBow7G1913 Salvia bowleyana
Sc02g0008400 Simmondsia chinensis
Sed0009724 Sechium edule
SEGI_23985 Sequoiadendron giganteum
SEGI_36882 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07072 Striga asiatica
SMO118G0237 Selaginella moellendorffii
Solyc02g014380.3 Solanum lycopersicum
Sopen02g003330 Solanum pennellii
Sp2g17320 Schrenkiella parvula
TAR381G0292 Trochodendron aralioides
TAR381G0820 Trochodendron aralioides
TAR381G1016 Trochodendron aralioides
TAR628G1450 Trochodendron aralioides
THA.LOC104805699 Tarenaya hassleriana
THA.LOC104823811 Tarenaya hassleriana
Thecc.08G076500 Theobroma cacao
Thhalv10004086m.g Eutrema salsugineum
TPR.G12418 Trifolium pratense
TPR.G21947 Trifolium pratense
TWI56G1147 Tripterygium wilfordii
vmacro04622 Vaccinium macrocarpon
VMungo1309G0989 Vigna mungo
Zm00001eb198670 Zea mays

User provided reference genes

Program Settings