Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p34570 Brassica napus
Aa31LG2G14290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis
Actinidia01255 Actinidia chinensis
Actinidia32787 Actinidia chinensis
Ah.05g167880 Amaranthus hybridus
AL1G45850 Arabidopsis lyrata
Aqoxy7G00899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea
AT1G31780 Arabidopsis thaliana
ATR0665G266 Amborella trichopoda
Atru.chr8.2633 Acer truncatum
AUR62015049 Chenopodium quinoa
AUR62017508 Chenopodium quinoa
BcaB07g32825 Brassica carinata
BcaC05g27192 Brassica carinata
BolC5t31821H Brassica oleracea
BraA09t38996Z Brassica rapa
C05p30980 Brassica napus
CAN.G930.8 Capsicum annuum
CARHR031080 Cardamine hirsuta
Carub.0001s3008 Capsella rubella
Ca_25034_v3 Cicer arietinum L.
CBR_g61501 Chara braunii
CBR_g61503 Chara braunii
Cc07_g20650 Coffea canephora
Cc08_g05630 Coffea canephora
CDE04G2738 Ceratophyllum demersum
Ciclev10011152m.g Citrus clementina
CiPaw.11G075700 Carya illinoinensis
ClCG11G016030 Citrullus lanatus
COL.COLO4_11286 Corchorus olitorius
Cpa.g.sc90.31 Carica papaya
Cre13.g587750 Chlamydomonas reinhardtii
CsaV3_4G027950 Cucumis sativus L.
CsaV3_4G027980 Cucumis sativus L.
CSS0004945 Camellia sinensis var. sinensis
CSS0012136 Camellia sinensis var. sinensis
CSS0027781 Camellia sinensis var. sinensis
CSS0030107 Camellia sinensis var. sinensis
DCAR_001483 Daucus carota
Dinv41808 Davidia involucrata
Dinv41809 Davidia involucrata
Duzib205G1840 Durio zibethinus
ECA240G2428 Erigeron canadensis
EL10Ac5g11241 Beta vulgaris
Eucgr.D02557 Eucalyptus grandis
FAN15G1703 Fragaria x ananassa
FAN15G2248 Fragaria x ananassa
FAN20G0920 Fragaria x ananassa
FAN27G0701 Fragaria x ananassa
FvH4_2g37280 Fragaria vesca
Glyma.01G154450 Glycine max
Glyma.01G154501 Glycine max
Glyma.11G090100 Glycine max
Gohir.A08G149700 Gossypium hirsutum
Gohir.D08G170700 Gossypium hirsutum
Gohir.D08G170800 Gossypium hirsutum
Gorai.004G178200 Gossypium raimondii
GSVIVG01013198001 Vitis vinifera
HanXRQChr03g0068151 Helianthus annuus
Haze_02517 Corylus avellana
HPP92_018761 Vanilla planifolia
HPP92_018762 Vanilla planifolia
Hund03634 Selenicereus undatus
Hund03711 Selenicereus undatus
Hund04204 Selenicereus undatus
Hund04318 Selenicereus undatus
Hund07510 Selenicereus undatus
Hund12492 Selenicereus undatus
Hund16023 Selenicereus undatus
Hund18062 Selenicereus undatus
Hund18265 Selenicereus undatus
Hund26370 Selenicereus undatus
Hund29872 Selenicereus undatus
Hund30647 Selenicereus undatus
Lalb_Chr09g0324961 Lupinus albus
Lalb_Chr16g0380331 Lupinus albus
Lj2g0027044 Lotus japonicus
Lj9C202G6 Lonicera japonica
Lsat_1_v5_gn_9_124460 Lactuca sativa
Manes.15G189800 Manihot esculenta
Mapoly0009s0222 Marchantia polymorpha
MBI04_g37458_MAGBIO Magnolia biondii
MCO03G158 Micromonas commoda
MD13G1243800 Malus domestica
MD13G1243900 Malus domestica
MD13G1244000 Malus domestica
Medtr5g025410 Medicago truncatula
MELO3C010519.2 Cucumis melo
Migut.A00530 Erythranthe guttata
MSTRG.25741 Avicennia marina
Nitab4.5_0000030g0410 Nicotiana tabacum
Nitab4.5_0001333g0050 Nicotiana tabacum
Nn1g09379 Nelumbo nucifera
Oeu014108.2 Olea europaea
Oeu039635.2 Olea europaea
Os03g0225600 Oryza sativa ssp. japonica
Peaxi162Scf00193g00811 Petunia axillaris
PGR031G2625 Punica granatum
PGSC0003DMG400001956 Solanum tuberosum
Phvul.002G121100 Phaseolus vulgaris
Potri.004G236600 Populus trichocarpa
Pp3c2_23210 Physcomitrium patens
PRCOL_00001869 Prasinoderma coloniale
Prupe.1G077200 Prunus persica
Psat2g146720 Pisum sativum
PSO675G7478 Papaver somniferum
PSO732G0580 Papaver somniferum
QL12p003889 Quercus lobata
RcHm_v2.0_Chr6g0304421 Rosa chinensis
Rhsim11G0036600 Rhododendron simsii
Sabra01G0180800 Salix brachista
SalBow4G1488 Salvia bowleyana
Sc21g0000770 Simmondsia chinensis
Sed0008250 Sechium edule
SEGI_32977 Sequoiadendron giganteum
SGA_v2.0_scaffold96G29093 Striga asiatica
SMO339G0033 Selaginella moellendorffii
Solyc08g075440.4 Solanum lycopersicum
Sopen08g024070 Solanum pennellii
Sp1g27470 Schrenkiella parvula
TAR375G1104 Trochodendron aralioides
THA.LOC104798522 Tarenaya hassleriana
Thecc.03G318700 Theobroma cacao
Thhalv10006980m.g Eutrema salsugineum
TPR.G11479 Trifolium pratense
TPR.G8989 Trifolium pratense
TWI79G0428 Tripterygium wilfordii
unitig_748.g7392 Utricularia gibba
vmacro00085 Vaccinium macrocarpon
VMungo1215G1610 Vigna mungo
Zm00001eb009310 Zea mays
Zm00001eb399610 Zea mays

User provided reference genes

Program Settings