Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p45210 Brassica napus
Aa31LG5G12950 Aethionema arabicum
Ah.10g037420 Amaranthus hybridus
AL3G11750 Arabidopsis lyrata
Aqoxy3G00622 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BFCK6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3003A Arachis hypogaea
AT3G02450 Arabidopsis thaliana
ATR0691G064 Amborella trichopoda
Atru.chr8.784 Acer truncatum
AUR62014563 Chenopodium quinoa
AUR62039397 Chenopodium quinoa
BcaB08g34576 Brassica carinata
BcaC05g30355 Brassica carinata
BolC5t35082H Brassica oleracea
BraA05t23140Z Brassica rapa
CAN.G579.5 Capsicum annuum
CANSAT64G0109 Cannabis sativa
CARHR076420 Cardamine hirsuta
Carub.0003s0154 Capsella rubella
Ca_26511_v3 Cicer arietinum L.
CBR_g27953 Chara braunii
Cc07_g04860 Coffea canephora
CDE01G0418 Ceratophyllum demersum
CDE02G0517 Ceratophyllum demersum
Ciclev10011254m.g Citrus clementina
CiPaw.03G007200 Carya illinoinensis
CiPaw.04G005100 Carya illinoinensis
ClCG00G004970 Citrullus lanatus
ClCG11G005130 Citrullus lanatus
COL.COLO4_22347 Corchorus olitorius
COL.COLO4_22348 Corchorus olitorius
Cpa.g.sc652.5 Carica papaya
Cre09.g393950 Chlamydomonas reinhardtii
CsaV3_5G038890 Cucumis sativus L.
CSS0006259 Camellia sinensis var. sinensis
DCAR_026283 Daucus carota
Dinv33900 Davidia involucrata
Dinv33901 Davidia involucrata
Dinv33902 Davidia involucrata
ECA232G4082 Erigeron canadensis
ECA232G4344 Erigeron canadensis
ECA233G4460 Erigeron canadensis
ECA238G3930 Erigeron canadensis
ECA246G0065 Erigeron canadensis
ECA248G0952 Erigeron canadensis
ECA248G1341 Erigeron canadensis
EL10Ac2g04653 Beta vulgaris
Eucgr.I02102 Eucalyptus grandis
FAN02G1925 Fragaria x ananassa
FAN05G1104 Fragaria x ananassa
FAN09G2497 Fragaria x ananassa
FAN14G0934 Fragaria x ananassa
FvH4_6g45740 Fragaria vesca
Glyma.13G049800 Glycine max
Glyma.19G040200 Glycine max
Gohir.A07G176200 Gossypium hirsutum
Gohir.D07G183300 Gossypium hirsutum
Gorai.001G203700 Gossypium raimondii
GSVIVG01036484001 Vitis vinifera
HanXRQChr07g0200121 Helianthus annuus
HanXRQChr09g0263351 Helianthus annuus
HanXRQChr14g0439421 Helianthus annuus
HanXRQChr14g0448051 Helianthus annuus
HanXRQChr15g0472891 Helianthus annuus
Haze_14084 Corylus avellana
HPP92_019895 Vanilla planifolia
Hund13747 Selenicereus undatus
Lalb_Chr02g0158491 Lupinus albus
Lalb_Chr06g0174771 Lupinus albus
Lj2g0016349 Lotus japonicus
Lj7A7T33 Lonicera japonica
Lju237A1G67 Lonicera japonica
Lsat_1_v5_gn_3_94620 Lactuca sativa
Lsat_1_v5_gn_4_175240 Lactuca sativa
Lsat_1_v5_gn_4_175320 Lactuca sativa
Lsat_1_v5_gn_5_122081 Lactuca sativa
Lsat_1_v5_gn_5_122161 Lactuca sativa
Lsat_1_v5_gn_5_122260 Lactuca sativa
Manes.02G063800 Manihot esculenta
Mapoly0124s0048 Marchantia polymorpha
MBI15_g22717_MAGBIO Magnolia biondii
MBI15_g38438_MAGBIO Magnolia biondii
MCO04G023 Micromonas commoda
MD09G1080100 Malus domestica
MD17G1070600 Malus domestica
Medtr6g016600 Medicago truncatula
MELO3C022077.2 Cucumis melo
Migut.H00557 Erythranthe guttata
MSTRG.23840 Avicennia marina
Nitab4.5_0000612g0020 Nicotiana tabacum
Nitab4.5_0012845g0010 Nicotiana tabacum
Nn4g23622 Nelumbo nucifera
Oeu032862.4 Olea europaea
Os04g0466100 Oryza sativa ssp. japonica
Peaxi162Scf00479g00438 Petunia axillaris
PGR004G1801 Punica granatum
PGSC0003DMG400018774 Solanum tuberosum
PGSC0003DMG400032085 Solanum tuberosum
Phvul.004G047500 Phaseolus vulgaris
Potri.004G106500 Populus trichocarpa
Pp3c4_20860 Physcomitrium patens
PRCOL_00002901 Prasinoderma coloniale
Prupe.3G243600 Prunus persica
Psat1g063760 Pisum sativum
PSO017G5302 Papaver somniferum
PSO478G3628 Papaver somniferum
QL02p054271 Quercus lobata
RcHm_v2.0_Chr2g0163931 Rosa chinensis
Rhsim08G0080800 Rhododendron simsii
Sabra04G0075600 Salix brachista
SalBow1G0891 Salvia bowleyana
SalBow1G3207 Salvia bowleyana
Sc14g0003360 Simmondsia chinensis
Sed0010173 Sechium edule
SEGI_22702 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19027 Striga asiatica
SMO147G0211 Selaginella moellendorffii
Solyc03g046340.3 Solanum lycopersicum
Sopen03g009850 Solanum pennellii
Sp3g01480 Schrenkiella parvula
TAR374G1626 Trochodendron aralioides
THA.LOC104820962 Tarenaya hassleriana
Thecc.04G145500 Theobroma cacao
Thhalv10020311m.g Eutrema salsugineum
TPR.G19264 Trifolium pratense
TPR.G27154 Trifolium pratense
TPR.G39709 Trifolium pratense
TWI34G1447 Tripterygium wilfordii
TWI60G0429 Tripterygium wilfordii
unitig_899.g15119 Utricularia gibba
vmacro18094 Vaccinium macrocarpon
VMungo0464G0307 Vigna mungo
Zm00001eb080320 Zea mays
Zm00001eb092380 Zea mays

User provided reference genes

Program Settings