Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30210 Brassica napus
A03p50860 Brassica napus
Aa31LG10G3050 Aethionema arabicum
Aa31LG6G670 Aethionema arabicum
Actinidia00858 Actinidia chinensis
AL7G36590 Arabidopsis lyrata
AL8G11670 Arabidopsis lyrata
Aqoxy3G02039 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I145LQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JH6JIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MAGV51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U482D3 Arachis hypogaea
AT5G46680 Arabidopsis thaliana
ATR1132G073 Amborella trichopoda
Atru.chr7.2335 Acer truncatum
AUR62024049 Chenopodium quinoa
AUR62040438 Chenopodium quinoa
BcaC03g16871 Brassica carinata
BcaC06g31458 Brassica carinata
BcaC06g33618 Brassica carinata
BolC2t10809H Brassica oleracea
BolC7t45434H Brassica oleracea
BraA02t08037Z Brassica rapa
BraA03t14173Z Brassica rapa
C02p47730 Brassica napus
C07p49250 Brassica napus
CAN.G1360.18 Capsicum annuum
CAN.G625.40 Capsicum annuum
CANSAT54G2399 Cannabis sativa
CARHR174820 Cardamine hirsuta
CARHR224650 Cardamine hirsuta
Carub.0007s2342 Capsella rubella
Carub.0008s0124 Capsella rubella
Ca_14577_v3 Cicer arietinum L.
Cc05_g08520 Coffea canephora
Cfa012588 Carpinus fangiana
Ciclev10008244m.g Citrus clementina
CiPaw.03G192600 Carya illinoinensis
ClCG07G002660 Citrullus lanatus
COL.COLO4_33609 Corchorus olitorius
Cpa.g.sc90.66 Carica papaya
CsaV3_4G030900 Cucumis sativus L.
CsaV3_5G005440 Cucumis sativus L.
CsaV3_5G013070 Cucumis sativus L.
CsaV3_UNG017130 Cucumis sativus L.
CSS0001557 Camellia sinensis var. sinensis
DCAR_018956 Daucus carota
Dinv11955 Davidia involucrata
Dinv12372 Davidia involucrata
Duzib116G0841 Durio zibethinus
Duzib160G0406 Durio zibethinus
ECA240G0139 Erigeron canadensis
Eucgr.K01145 Eucalyptus grandis
FAN23G2012 Fragaria x ananassa
FvH4_6g27690 Fragaria vesca
Glyma.03G075500 Glycine max
Gohir.A10G242800 Gossypium hirsutum
Gohir.A13G157000 Gossypium hirsutum
Gohir.D10G254800 Gossypium hirsutum
Gohir.D13G161800 Gossypium hirsutum
Gorai.011G295800 Gossypium raimondii
Gorai.013G183800 Gossypium raimondii
GSVIVG01024415001 Vitis vinifera
HanXRQChr13g0421081 Helianthus annuus
Hma1.2p1_0067F.1_g036940 Hydrangea macrophylla
HPP92_017208 Vanilla planifolia
Hund00863 Selenicereus undatus
Lalb_Chr01g0007701 Lupinus albus
Lalb_Chr01g0013691 Lupinus albus
Lalb_Chr02g0154491 Lupinus albus
Lalb_Chr02g0159181 Lupinus albus
Lalb_Chr06g0171701 Lupinus albus
Lalb_Chr12g0209451 Lupinus albus
Lalb_Chr17g0337131 Lupinus albus
Lalb_Chr19g0127261 Lupinus albus
Lalb_Chr24g0401191 Lupinus albus
Lj1P677T28 Lonicera japonica
Lj3g0025693 Lotus japonicus
Lsat_1_v5_gn_3_116841 Lactuca sativa
Manes.08G068200 Manihot esculenta
Manes.09G079700 Manihot esculenta
MD07G1055100 Malus domestica
MD15G1427800 Malus domestica
Medtr0220s0090 Medicago truncatula
Medtr7g024140 Medicago truncatula
MELO3C004015.2 Cucumis melo
MELO3C020050.2 Cucumis melo
MELO3C033809.2 Cucumis melo
Migut.F00129 Erythranthe guttata
Nitab4.5_0000249g0090 Nicotiana tabacum
Nitab4.5_0000753g0050 Nicotiana tabacum
Nitab4.5_0007923g0040 Nicotiana tabacum
Nitab4.5_0007990g0010 Nicotiana tabacum
Nn2g12528 Nelumbo nucifera
Os02g0793200 Oryza sativa ssp. japonica
Peaxi162Scf00888g00007 Petunia axillaris
PGR142G3640 Punica granatum
PGSC0003DMG400026386 Solanum tuberosum
PGSC0003DMG401020415 Solanum tuberosum
Phvul.009G126100 Phaseolus vulgaris
Potri.006G006500 Populus trichocarpa
Prupe.3G114500 Prunus persica
Prupe.4G280300 Prunus persica
Psat0s3054g0080 Pisum sativum
Psat0s443g0080 Pisum sativum
Psat5g177920 Pisum sativum
PSO063G6562 Papaver somniferum
PSO782G5737 Papaver somniferum
QL08p042254 Quercus lobata
RcHm_v2.0_Chr2g0130841 Rosa chinensis
Rhsim04G0075800 Rhododendron simsii
Sabra06G0005200 Salix brachista
SalBow4G2062 Salvia bowleyana
Sc04g0009990 Simmondsia chinensis
Sed0008626 Sechium edule
Sed0024338 Sechium edule
SGA_v2.0_scaffold18G08491 Striga asiatica
Solyc02g086230.2 Solanum lycopersicum
Solyc07g055220.3 Solanum lycopersicum
Sopen02g030910 Solanum pennellii
Sopen07g027000 Solanum pennellii
Sp2g11490 Schrenkiella parvula
Sp7g16190 Schrenkiella parvula
TAR626G0412 Trochodendron aralioides
TAR627G1060 Trochodendron aralioides
THA.LOC104806715 Tarenaya hassleriana
Thecc.01G153300 Theobroma cacao
Thhalv10001221m.g Eutrema salsugineum
Thhalv10025145m.g Eutrema salsugineum
TPR.G14745 Trifolium pratense
TPR.G15161 Trifolium pratense
TWI12G0566 Tripterygium wilfordii
TWI31G0445 Tripterygium wilfordii
VMungo1309G1849 Vigna mungo
Zm00001eb201010 Zea mays

User provided reference genes

Program Settings