Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42240 Brassica napus
Aa31LG11G1300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1564 Anthoceros agrestis
Actinidia13561 Actinidia chinensis
Actinidia25029 Actinidia chinensis
Ah.13g067320 Amaranthus hybridus
Ah.13g067330 Amaranthus hybridus
AL1G36890 Arabidopsis lyrata
AL8G39110 Arabidopsis lyrata
Aqoxy7G00656 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6UH5I2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PDC51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea
AT5G62290 Arabidopsis thaliana
ATR0733G084 Amborella trichopoda
Atru.chr1.651 Acer truncatum
Atru.chr1.654 Acer truncatum
AUR62016115 Chenopodium quinoa
AUR62035061 Chenopodium quinoa
BcaB07g29785 Brassica carinata
BolC2t12268H Brassica oleracea
BolC3t18716H Brassica oleracea
BraA02t09152Z Brassica rapa
BraA06t25849Z Brassica rapa
C02p62090 Brassica napus
CAN.G152.22 Capsicum annuum
CANSAT56G2670 Cannabis sativa
CARHR276070 Cardamine hirsuta
Carub.0008s2298 Capsella rubella
Ca_00244_v3 Cicer arietinum L.
Ca_30761_v3 Cicer arietinum L.
CBR_g40194 Chara braunii
Cc02_g04010 Coffea canephora
CDE02G0217 Ceratophyllum demersum
Cfa008223 Carpinus fangiana
Ciclev10005797m.g Citrus clementina
Ciclev10006356m.g Citrus clementina
CiPaw.03G096300 Carya illinoinensis
ClCG01G005160 Citrullus lanatus
COL.COLO4_14166 Corchorus olitorius
COL.COLO4_29300 Corchorus olitorius
Cpa.g.sc130.1 Carica papaya
Cre12.g538150 Chlamydomonas reinhardtii
CSS0015308 Camellia sinensis var. sinensis
DCAR_015743 Daucus carota
DCAR_018618 Daucus carota
Dinv22971 Davidia involucrata
Dinv28543 Davidia involucrata
Duzib084G0609 Durio zibethinus
Duzib205G1232 Durio zibethinus
ECA232G3412 Erigeron canadensis
EL10Ac3g05805 Beta vulgaris
Eucgr.K00149 Eucalyptus grandis
FvH4_7g28050 Fragaria vesca
Glyma.09G233200 Glycine max
Glyma.14G044000 Glycine max
Gohir.A07G204500 Gossypium hirsutum
Gohir.D07G210500 Gossypium hirsutum
Gorai.001G237900 Gossypium raimondii
GSVIVG01018540001 Vitis vinifera
HanXRQChr08g0223561 Helianthus annuus
HanXRQChr16g0512531 Helianthus annuus
Haze_13835 Corylus avellana
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla
HPP92_004603 Vanilla planifolia
Hund04625 Selenicereus undatus
Lalb_Chr04g0260971 Lupinus albus
Lalb_Chr15g0077021 Lupinus albus
Lj3g0023650 Lotus japonicus
Lsat_1_v5_gn_8_9401 Lactuca sativa
Lsat_1_v5_gn_9_52481 Lactuca sativa
Manes.06G137000 Manihot esculenta
Mapoly0005s0155 Marchantia polymorpha
MBI12_g31644_MAGBIO Magnolia biondii
MCO15G129 Micromonas commoda
MD01G1184800 Malus domestica
MD07G1257000 Malus domestica
Medtr4g033850 Medicago truncatula
MELO3C005412.2 Cucumis melo
Migut.F00442 Erythranthe guttata
MSTRG.8809 Avicennia marina
Nitab4.5_0000072g0480 Nicotiana tabacum
Nitab4.5_0000481g0050 Nicotiana tabacum
Nn4g26371 Nelumbo nucifera
Oeu039209.1 Olea europaea
Os03g0249300 Oryza sativa ssp. japonica
Os10g0170000 Oryza sativa ssp. japonica
Peaxi162Scf01372g00048 Petunia axillaris
PGR142G0586 Punica granatum
PGSC0003DMG400023012 Solanum tuberosum
Phvul.011G004300 Phaseolus vulgaris
Potri.012G128500 Populus trichocarpa
Potri.015G129900 Populus trichocarpa
Pp3c16_14910 Physcomitrium patens
Pp3c5_5760 Physcomitrium patens
PRCOL_00002770 Prasinoderma coloniale
Prupe.2G281200 Prunus persica
Psat7g191960 Pisum sativum
PSO063G7367 Papaver somniferum
PSO478G4436 Papaver somniferum
PSO782G3258 Papaver somniferum
QL09p018886 Quercus lobata
RcHm_v2.0_Chr1g0374961 Rosa chinensis
Rhsim03G0170700 Rhododendron simsii
Sabra12G0096500 Salix brachista
Sabra15G0143400 Salix brachista
SalBow4G2223 Salvia bowleyana
SalBow4G3324 Salvia bowleyana
Sc13g0007790 Simmondsia chinensis
Sed0014362 Sechium edule
Sed0027239 Sechium edule
SEGI_33447 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01165 Striga asiatica
SGA_v2.0_scaffold486G52387 Striga asiatica
SMO351G0592 Selaginella moellendorffii
Solyc03g083540.3 Solanum lycopersicum
Solyc06g011630.1 Solanum lycopersicum
Sopen03g023350 Solanum pennellii
Sp2g25490 Schrenkiella parvula
TAR374G0299 Trochodendron aralioides
TAR375G0912 Trochodendron aralioides
THA.LOC104821401 Tarenaya hassleriana
Thecc.03G160100 Theobroma cacao
Thecc.03G160400 Theobroma cacao
Thhalv10004861m.g Eutrema salsugineum
TPR.G15119 Trifolium pratense
TWI39G1176 Tripterygium wilfordii
unitig_37.g12504 Utricularia gibba
vmacro06774 Vaccinium macrocarpon
VMungo1127G2067 Vigna mungo
Zm00001eb010690 Zea mays
Zm00001eb224250 Zea mays

User provided reference genes

Program Settings