Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p32800 Brassica napus
Aa31LG2G2420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2823 Anthoceros agrestis
Actinidia03832 Actinidia chinensis
Actinidia06809 Actinidia chinensis
Ah.06g195530 Amaranthus hybridus
AL2G21140 Arabidopsis lyrata
Aqoxy2G04057 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.UZF72T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3Q9UL Arachis hypogaea
AT1G65320 Arabidopsis thaliana
ATR0561G270 Amborella trichopoda
Atru.chr12.1803 Acer truncatum
Atru.chr12.1804 Acer truncatum
AUR62000324 Chenopodium quinoa
AUR62000325 Chenopodium quinoa
AUR62006669 Chenopodium quinoa
BcaB02g06947 Brassica carinata
BcaB04g17522 Brassica carinata
BcaB07g32511 Brassica carinata
BcaNung05534 Brassica carinata
BolC6t38993H Brassica oleracea
BraA07t30907Z Brassica rapa
C06p39010 Brassica napus
CAN.G217.1 Capsicum annuum
CANSAT54G2247 Cannabis sativa
CARHR056990 Cardamine hirsuta
Carub.0002s1099 Capsella rubella
Ca_07968_v3 Cicer arietinum L.
Cc09_g03460 Coffea canephora
CDE05G2572 Ceratophyllum demersum
CDE05G2651 Ceratophyllum demersum
Cfa006272 Carpinus fangiana
Ciclev10012096m.g Citrus clementina
CiPaw.07G079000 Carya illinoinensis
ClCG11G010880 Citrullus lanatus
COL.COLO4_27401 Corchorus olitorius
COL.COLO4_27402 Corchorus olitorius
Cpa.g.sc123.2 Carica papaya
Cpa.g.sc123.5 Carica papaya
CsaV3_2G009590 Cucumis sativus L.
CSS0022114 Camellia sinensis var. sinensis
DCAR_023850 Daucus carota
Dinv02954 Davidia involucrata
Dinv29116 Davidia involucrata
Duzib128G0943 Durio zibethinus
Duzib177G1068 Durio zibethinus
ECA233G3371 Erigeron canadensis
EL10Ac4g09981 Beta vulgaris
Eucgr.B01402 Eucalyptus grandis
FAN02G2606 Fragaria x ananassa
FAN05G3082 Fragaria x ananassa
FAN09G3203 Fragaria x ananassa
FAN14G1411 Fragaria x ananassa
FvH4_6g00690 Fragaria vesca
Glyma.09G251700 Glycine max
Glyma.18G240900 Glycine max
Gohir.A11G304050 Gossypium hirsutum
Gohir.A13G154600 Gossypium hirsutum
Gohir.D11G319500 Gossypium hirsutum
Gohir.D13G159300 Gossypium hirsutum
Gorai.007G349600 Gossypium raimondii
Gorai.013G180000 Gossypium raimondii
GSVIVG01019128001 Vitis vinifera
HanXRQChr05g0156971 Helianthus annuus
Haze_04540 Corylus avellana
HPP92_003199 Vanilla planifolia
Hund07333 Selenicereus undatus
Hund21893 Selenicereus undatus
Hund27503 Selenicereus undatus
Lalb_Chr01g0020331 Lupinus albus
Lalb_Chr19g0126721 Lupinus albus
Lj1C584T2 Lonicera japonica
Lj1C584T3 Lonicera japonica
Lj1g0020299 Lotus japonicus
Lsat_1_v5_gn_8_2121 Lactuca sativa
Manes.08G104500 Manihot esculenta
Manes.09G184500 Manihot esculenta
Mapoly0030s0135 Marchantia polymorpha
MBI07_g22285_MAGBIO Magnolia biondii
MD04G1243500 Malus domestica
MD12G1259100 Malus domestica
Medtr7g079680 Medicago truncatula
MELO3C008749.2 Cucumis melo
Migut.F01881 Erythranthe guttata
MSTRG.322 Avicennia marina
MSTRG.8218 Avicennia marina
Nitab4.5_0000946g0070 Nicotiana tabacum
Nitab4.5_0001857g0010 Nicotiana tabacum
Nn1g09751 Nelumbo nucifera
Nn3g20159 Nelumbo nucifera
Oeu057509.1 Olea europaea
Oeu062056.1 Olea europaea
Os01g0920000 Oryza sativa ssp. japonica
Os08g0529200 Oryza sativa ssp. japonica
Peaxi162Scf00156g00415 Petunia axillaris
Peaxi162Scf00976g00112 Petunia axillaris
PGR119G1058 Punica granatum
PGSC0003DMG400010533 Solanum tuberosum
Phvul.008G055300 Phaseolus vulgaris
Potri.013G087100 Populus trichocarpa
Potri.019G052650 Populus trichocarpa
Prupe.6G359700 Prunus persica
Psat3g103920 Pisum sativum
PSO170G2522 Papaver somniferum
PSO357G0677 Papaver somniferum
RcHm_v2.0_Chr3g0448131 Rosa chinensis
Rhsim05G0168400 Rhododendron simsii
Sabra13G0076900 Salix brachista
Sabra19G0062300 Salix brachista
SalBow6G7075 Salvia bowleyana
Sc09g0001540 Simmondsia chinensis
Sed0018334 Sechium edule
Sed0025831 Sechium edule
SEGI_22479 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33173 Striga asiatica
SHI13731 Sapria himalayana
Solyc04g056630.3 Solanum lycopersicum
Sopen04g025550 Solanum pennellii
Sp5g19990 Schrenkiella parvula
TAR362G1314 Trochodendron aralioides
TAR633G1216 Trochodendron aralioides
THA.LOC104805695 Tarenaya hassleriana
THA.LOC104821953 Tarenaya hassleriana
THA.LOC104823814 Tarenaya hassleriana
Thecc.05G201400 Theobroma cacao
Thhalv10018605m.g Eutrema salsugineum
TPR.G28454 Trifolium pratense
TWI36G0998 Tripterygium wilfordii
unitig_736.g22805 Utricularia gibba
vmacro19612 Vaccinium macrocarpon
vmacro19613 Vaccinium macrocarpon
VMungo1383G1630 Vigna mungo
Zm00001eb036450 Zea mays
Zm00001eb143290 Zea mays

User provided reference genes

Program Settings