Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p10190 Brassica napus
Aa31LG9G17820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4470 Anthoceros agrestis
Actinidia34781 Actinidia chinensis
Actinidia38901 Actinidia chinensis
AL7G45260 Arabidopsis lyrata
Aqoxy2G04066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5996BE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJZV2I Arachis hypogaea
AT5G36290 Arabidopsis thaliana
ATR1147G024 Amborella trichopoda
Atru.chr12.1793 Acer truncatum
AUR62006663 Chenopodium quinoa
BcaB02g08037 Brassica carinata
BcaB06g27030 Brassica carinata
BcaC02g09519 Brassica carinata
BolC4t25948H Brassica oleracea
BraA04t16686Z Brassica rapa
C04p43670 Brassica napus
CAN.G1177.13 Capsicum annuum
CANSAT54G0917 Cannabis sativa
CARHR216450 Cardamine hirsuta
Carub.0007s3194 Capsella rubella
Ca_07976_v3 Cicer arietinum L.
CBR_g36743 Chara braunii
Cc09_g03560 Coffea canephora
CDE05G0724 Ceratophyllum demersum
CDE05G0882 Ceratophyllum demersum
Cfa026150 Carpinus fangiana
Ciclev10012397m.g Citrus clementina
CiPaw.01G093000 Carya illinoinensis
ClCG11G010760 Citrullus lanatus
COL.COLO4_27386 Corchorus olitorius
Cpa.g.sc39.1 Carica papaya
CsaV3_2G009660 Cucumis sativus L.
CSS0007646 Camellia sinensis var. sinensis
CSS0016478 Camellia sinensis var. sinensis
DCAR_023853 Daucus carota
Dinv06979 Davidia involucrata
Dinv29108 Davidia involucrata
Duzib106G1207 Durio zibethinus
Duzib177G0876 Durio zibethinus
EL10Ac4g09975 Beta vulgaris
Eucgr.H01386 Eucalyptus grandis
FAN02G2451 Fragaria x ananassa
FAN05G0602 Fragaria x ananassa
FAN14G0902 Fragaria x ananassa
FvH4_6g00560 Fragaria vesca
Glyma.09G251100 Glycine max
Glyma.18G241400 Glycine max
Gohir.A11G304600 Gossypium hirsutum
Gohir.D11G320000 Gossypium hirsutum
Gorai.007G350200 Gossypium raimondii
GSVIVG01019117001 Vitis vinifera
HanXRQChr16g0512051 Helianthus annuus
HanXRQChr16g0520251 Helianthus annuus
Haze_04546 Corylus avellana
HPP92_020207 Vanilla planifolia
HPP92_020218 Vanilla planifolia
Hund07341 Selenicereus undatus
Hund21898 Selenicereus undatus
Lalb_Chr01g0020341 Lupinus albus
Lalb_Chr19g0127601 Lupinus albus
Lj1A1227G89 Lonicera japonica
Lj1g0004654 Lotus japonicus
Lsat_1_v5_gn_2_106141 Lactuca sativa
Lsat_1_v5_gn_5_162860 Lactuca sativa
Lsat_1_v5_gn_8_2141 Lactuca sativa
Lsat_1_v5_gn_8_55881 Lactuca sativa
Lsat_1_v5_gn_9_48781 Lactuca sativa
Manes.12G006250 Manihot esculenta
Mapoly0030s0088 Marchantia polymorpha
MCO03G382 Micromonas commoda
MD04G1244200 Malus domestica
MD12G1260000 Malus domestica
Medtr7g079850 Medicago truncatula
Migut.F01875 Erythranthe guttata
MSTRG.27387 Avicennia marina
MSTRG.327 Avicennia marina
MSTRG.8214 Avicennia marina
Nitab4.5_0001308g0140 Nicotiana tabacum
Nitab4.5_0001653g0130 Nicotiana tabacum
Nitab4.5_0002233g0040 Nicotiana tabacum
Nitab4.5_0006595g0020 Nicotiana tabacum
Nn1g09810 Nelumbo nucifera
Oeu010159.1 Olea europaea
Oeu023164.2 Olea europaea
Oeu040499.1 Olea europaea
Os08g0528500 Oryza sativa ssp. japonica
Os11g0472500 Oryza sativa ssp. japonica
Peaxi162Scf00253g00073 Petunia axillaris
Peaxi162Scf00344g01310 Petunia axillaris
PGR031G0917 Punica granatum
PGSC0003DMG400016166 Solanum tuberosum
Phvul.008G054700 Phaseolus vulgaris
Potri.013G086700 Populus trichocarpa
Potri.019G053400 Populus trichocarpa
Pp3c24_6730 Physcomitrium patens
Pp3c8_14760 Physcomitrium patens
PRCOL_00006182 Prasinoderma coloniale
Prupe.6G360700 Prunus persica
Psat3g138560 Pisum sativum
PSO017G2931 Papaver somniferum
QL01p048543 Quercus lobata
RcHm_v2.0_Chr3g0447951 Rosa chinensis
Rhsim09G0129800 Rhododendron simsii
Sabra13G0077200 Salix brachista
SalBow1G6469 Salvia bowleyana
Sc09g0001500 Simmondsia chinensis
Sed0003335 Sechium edule
Sed0016855 Sechium edule
SEGI_17978 Sequoiadendron giganteum
SEGI_37828 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21506 Striga asiatica
SMO367G0284 Selaginella moellendorffii
SMO367G1059 Selaginella moellendorffii
Solyc09g015440.1 Solanum lycopersicum
Solyc11g008890.2 Solanum lycopersicum
Sopen09g009140 Solanum pennellii
Sopen11g004670 Solanum pennellii
Sp7g05800 Schrenkiella parvula
TAR365G1064 Trochodendron aralioides
THA.LOC104805697 Tarenaya hassleriana
THA.LOC104823812 Tarenaya hassleriana
Thecc.05G199900 Theobroma cacao
Thhalv10004689m.g Eutrema salsugineum
TPR.G30354 Trifolium pratense
TWI18G0428 Tripterygium wilfordii
TWI36G0022 Tripterygium wilfordii
unitig_26.g9569 Utricularia gibba
unitig_749.g13504 Utricularia gibba
vmacro10407 Vaccinium macrocarpon
VMungo1383G1540 Vigna mungo
Zm00001eb036320 Zea mays
Zm00001eb169910 Zea mays

User provided reference genes

Program Settings