Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17570 Brassica napus
A09p10030 Brassica napus
Aa31LG1G14770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis
Actinidia31004 Actinidia chinensis
Ah.03g141620 Amaranthus hybridus
AL8G45230 Arabidopsis lyrata
Aqoxy4G02673 Aquilegia oxysepala
Aqoxy4G02678 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea
AT5G66290 Arabidopsis thaliana
ATR0147G004 Amborella trichopoda
ATR0876G001 Amborella trichopoda
Atru.chr3.782 Acer truncatum
AUR62018084 Chenopodium quinoa
BcaB02g10036 Brassica carinata
BcaC04g23120 Brassica carinata
BcaC04g23124 Brassica carinata
BcaC06g34694 Brassica carinata
BcaNung04509 Brassica carinata
BcaNung05273 Brassica carinata
BolC7t43073H Brassica oleracea
BolC9t54077H Brassica oleracea
BraA09t36646Z Brassica rapa
C07p25530 Brassica napus
C09p11890 Brassica napus
CARHR281420 Cardamine hirsuta
Carub.0008s2820 Capsella rubella
Ca_24908_v3 Cicer arietinum L.
Cc07_g10570 Coffea canephora
CDE05G1720 Ceratophyllum demersum
CDE11G0627 Ceratophyllum demersum
Cfa006957 Carpinus fangiana
Ciclev10026469m.g Citrus clementina
CiPaw.08G133400 Carya illinoinensis
ClCG07G008420 Citrullus lanatus
COL.COLO4_21933 Corchorus olitorius
Cpa.g.sc6.229 Carica papaya
CsaV3_4G005730 Cucumis sativus L.
CSS0012385 Camellia sinensis var. sinensis
CSS0021905 Camellia sinensis var. sinensis
CSS0031169 Camellia sinensis var. sinensis
DCAR_017347 Daucus carota
Dinv33615 Davidia involucrata
Duzib147G0754 Durio zibethinus
EL10Ac3g07303 Beta vulgaris
Eucgr.K02152 Eucalyptus grandis
Eucgr.L03507 Eucalyptus grandis
FAN19G0086 Fragaria x ananassa
FAN23G1819 Fragaria x ananassa
FAN26G0019 Fragaria x ananassa
FAN28G1963 Fragaria x ananassa
FvH4_1g12000 Fragaria vesca
Glyma.01G167600 Glycine max
Glyma.11G075600 Glycine max
Gohir.A02G169800 Gossypium hirsutum
Gohir.A12G060300 Gossypium hirsutum
Gohir.D03G010200 Gossypium hirsutum
Gohir.D12G060400 Gossypium hirsutum
Gorai.003G010600 Gossypium raimondii
Gorai.008G063500 Gossypium raimondii
GSVIVG01018804001 Vitis vinifera
HanXRQChr15g0482851 Helianthus annuus
HanXRQChr16g0531031 Helianthus annuus
Haze_03794 Corylus avellana
HPP92_018404 Vanilla planifolia
Hund14038 Selenicereus undatus
Lalb_Chr16g0391171 Lupinus albus
Lj2A474G36 Lonicera japonica
Lj2C466G2 Lonicera japonica
Lj2C474G2 Lonicera japonica
Lj2g0025294 Lotus japonicus
Lsat_1_v5_gn_3_73980 Lactuca sativa
Lsat_1_v5_gn_4_152781 Lactuca sativa
Lsat_1_v5_gn_4_38760 Lactuca sativa
Manes.02G102700 Manihot esculenta
Mapoly0166s0009 Marchantia polymorpha
MBI05_g26512_MAGBIO Magnolia biondii
MD02G1134200 Malus domestica
MD15G1247200 Malus domestica
Medtr5g021750 Medicago truncatula
Medtr5g021780 Medicago truncatula
MELO3C016376.2 Cucumis melo
Migut.H01144 Erythranthe guttata
MSTRG.2698 Avicennia marina
Nitab4.5_0004254g0030 Nicotiana tabacum
Nitab4.5_0005721g0110 Nicotiana tabacum
Nn5g29268 Nelumbo nucifera
Nn6g32291 Nelumbo nucifera
Os03g0727100 Oryza sativa ssp. japonica
Peaxi162Scf00083g00086 Petunia axillaris
PGSC0003DMG400003554 Solanum tuberosum
Phvul.002G110400 Phaseolus vulgaris
Potri.005G116300 Populus trichocarpa
Potri.007G014000 Populus trichocarpa
Pp3c14_25740 Physcomitrium patens
Pp3c1_42750 Physcomitrium patens
Prupe.7G166600 Prunus persica
Psat2g155360 Pisum sativum
PSO170G3799 Papaver somniferum
PSO210G7806 Papaver somniferum
QL06p033647 Quercus lobata
QL06p033653 Quercus lobata
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis
RcHm_v2.0_Chr1g0353231 Rosa chinensis
RcHm_v2.0_Chr2g0099641 Rosa chinensis
RcHm_v2.0_Chr2g0126361 Rosa chinensis
RcHm_v2.0_Chr5g0080231 Rosa chinensis
Rhsim08G0034500 Rhododendron simsii
Sabra05G0095300 Salix brachista
Sabra07G0011400 Salix brachista
SalBow3G4629 Salvia bowleyana
Sc09g0006730 Simmondsia chinensis
Sc16g0002040 Simmondsia chinensis
Sc16g0006390 Simmondsia chinensis
Sc18g0002570 Simmondsia chinensis
Sed0005630 Sechium edule
SGA_v2.0_scaffold137G35098 Striga asiatica
SMO228G0004 Selaginella moellendorffii
Solyc02g084220.3 Solanum lycopersicum
Sopen02g028960 Solanum pennellii
Sp2g30330 Schrenkiella parvula
TAR376G0390 Trochodendron aralioides
TAR628G0339 Trochodendron aralioides
THA.LOC104819182 Tarenaya hassleriana
Thecc.01G021200 Theobroma cacao
Thhalv10004735m.g Eutrema salsugineum
TPR.G2344 Trifolium pratense
TWI09G0878 Tripterygium wilfordii
TWI73G0895 Tripterygium wilfordii
unitig_699.g19712 Utricularia gibba
vmacro18422 Vaccinium macrocarpon
VMungo1215G0268 Vigna mungo
Zm00001eb055930 Zea mays

User provided reference genes

Program Settings