Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01830 Brassica napus
A03p05910 Brassica napus
A10p24920 Brassica napus
Aa31LG3G14370 Aethionema arabicum
Actinidia22122 Actinidia chinensis
Actinidia30592 Actinidia chinensis
AL6G23910 Arabidopsis lyrata
Aqoxy5G03159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5FYJ3P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GED73I Arachis hypogaea
AT5G13290 Arabidopsis thaliana
ATR0582G032 Amborella trichopoda
Atru.chr12.1403 Acer truncatum
AUR62005708 Chenopodium quinoa
AUR62028847 Chenopodium quinoa
BcaB01g05365 Brassica carinata
BcaC04g19125 Brassica carinata
BcaNung01165 Brassica carinata
BcaNung01876 Brassica carinata
BolC2t06546H Brassica oleracea
BolC3t13194H Brassica oleracea
BolC9t59218H Brassica oleracea
BraA02t05157Z Brassica rapa
BraA03t09929Z Brassica rapa
BraA10t44554Z Brassica rapa
C02p06040 Brassica napus
C03p06810 Brassica napus
C09p63790 Brassica napus
CAN.G302.4 Capsicum annuum
CANSAT01G1549 Cannabis sativa
CARHR200150 Cardamine hirsuta
CARHR200170 Cardamine hirsuta
Carub.0006s1146 Capsella rubella
Ca_07074_v3 Cicer arietinum L.
Cc11_g15100 Coffea canephora
CDE02G3873 Ceratophyllum demersum
Cfa009442 Carpinus fangiana
Ciclev10005409m.g Citrus clementina
CiPaw.05G102100 Carya illinoinensis
CiPaw.06G108800 Carya illinoinensis
ClCG06G001750 Citrullus lanatus
ClCG07G011880 Citrullus lanatus
COL.COLO4_21788 Corchorus olitorius
Cpa.g.sc1571.2 Carica papaya
CsaV3_4G002280 Cucumis sativus L.
CsaV3_6G007770 Cucumis sativus L.
CSS0004805 Camellia sinensis var. sinensis
CSS0031430 Camellia sinensis var. sinensis
CSS0031606 Camellia sinensis var. sinensis
CSS0040803 Camellia sinensis var. sinensis
DCAR_024629 Daucus carota
Dinv09209 Davidia involucrata
Dinv19143 Davidia involucrata
Duzib052G0468 Durio zibethinus
Duzib132G0701 Durio zibethinus
Duzib248G0660 Durio zibethinus
ECA236G2273 Erigeron canadensis
EL10Ac6g13599 Beta vulgaris
Eucgr.B03552 Eucalyptus grandis
FAN07G0625 Fragaria x ananassa
FAN12G0671 Fragaria x ananassa
FAN17G2476 Fragaria x ananassa
FvH4_4g22780 Fragaria vesca
Glyma.08G257700 Glycine max
Glyma.18G282100 Glycine max
Gohir.A04G100700 Gossypium hirsutum
Gohir.D04G140000 Gossypium hirsutum
Gorai.012G124900 Gossypium raimondii
GSVIVG01001078001 Vitis vinifera
HanXRQChr12g0385731 Helianthus annuus
Haze_12493 Corylus avellana
HPP92_011737 Vanilla planifolia
HPP92_013595 Vanilla planifolia
Hund25505 Selenicereus undatus
Lalb_Chr04g0258111 Lupinus albus
Lalb_Chr17g0336471 Lupinus albus
Lj1g0019881 Lotus japonicus
Lj6C837T3 Lonicera japonica
Lsat_1_v5_gn_4_1681 Lactuca sativa
Manes.08G102000 Manihot esculenta
Manes.09G187402 Manihot esculenta
MBI07_g07336_MAGBIO Magnolia biondii
MD13G1129700 Malus domestica
MD16G1130000 Malus domestica
Medtr1g066600 Medicago truncatula
Medtr7g020850 Medicago truncatula
MELO3C017812.2 Cucumis melo
MELO3C022355.2 Cucumis melo
Migut.K01065 Erythranthe guttata
MSTRG.460 Avicennia marina
Nitab4.5_0000049g0100 Nicotiana tabacum
Nitab4.5_0002515g0020 Nicotiana tabacum
Nn3g16290 Nelumbo nucifera
Nn4g22150 Nelumbo nucifera
Oeu019439.1 Olea europaea
Oeu019441.1 Olea europaea
Oeu044511.1 Olea europaea
Os01g0927500 Oryza sativa ssp. japonica
Peaxi162Scf00128g01754 Petunia axillaris
PGR119G2412 Punica granatum
PGSC0003DMG400002250 Solanum tuberosum
Phvul.008G019200 Phaseolus vulgaris
Potri.001G066700 Populus trichocarpa
Potri.003G163300 Populus trichocarpa
Prupe.1G216600 Prunus persica
Psat3g190240 Pisum sativum
PSO017G0690 Papaver somniferum
PSO478G4799 Papaver somniferum
QL03p049603 Quercus lobata
RcHm_v2.0_Chr4g0429001 Rosa chinensis
Rhsim12G0017900 Rhododendron simsii
Sabra01G0046300 Salix brachista
Sabra03G0118800 Salix brachista
SalBow2G0268 Salvia bowleyana
Sc11g0000140 Simmondsia chinensis
Sed0002308 Sechium edule
Sed0022664 Sechium edule
Sed0024975 Sechium edule
SEGI_04370 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25941 Striga asiatica
Solyc05g023760.3 Solanum lycopersicum
Sopen05g018380 Solanum pennellii
Sp6g30700 Schrenkiella parvula
TAR371G1278 Trochodendron aralioides
TAR622G0344 Trochodendron aralioides
TAR629G2019 Trochodendron aralioides
THA.LOC104825465 Tarenaya hassleriana
Thecc.02G193700 Theobroma cacao
Thhalv10013721m.g Eutrema salsugineum
TPR.G4541 Trifolium pratense
TWI18G0498 Tripterygium wilfordii
TWI36G1620 Tripterygium wilfordii
vmacro01025 Vaccinium macrocarpon
VMungo1383G3495 Vigna mungo
Zm00001eb142560 Zea mays

User provided reference genes

Program Settings