Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11480 Brassica napus
Aa31LG3G9180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1777 Anthoceros agrestis
Actinidia08611 Actinidia chinensis
Actinidia30732 Actinidia chinensis
Actinidia34180 Actinidia chinensis
Ah.07g206170 Amaranthus hybridus
AL8G27450 Arabidopsis lyrata
Aqoxy7G00210 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea
AT5G52950 Arabidopsis thaliana
ATR1131G019 Amborella trichopoda
AUR62021063 Chenopodium quinoa
AUR62031469 Chenopodium quinoa
BcaB05g21993 Brassica carinata
BcaB08g35657 Brassica carinata
BcaB08g35658 Brassica carinata
BcaC03g14481 Brassica carinata
BolC2t08045H Brassica oleracea
BolC9t57143H Brassica oleracea
BraA02t06213Z Brassica rapa
BraA10t43127Z Brassica rapa
C02p19150 Brassica napus
C09p42670 Brassica napus
CAN.G108.10 Capsicum annuum
CARHR265920 Cardamine hirsuta
Carub.0008s1313 Capsella rubella
Ca_27881_v3 Cicer arietinum L.
CBR_g41297 Chara braunii
Cc02_g02050 Coffea canephora
CDE02G2607 Ceratophyllum demersum
Cfa016346 Carpinus fangiana
Cfa023062 Carpinus fangiana
CiPaw.06G006200 Carya illinoinensis
ClCG07G011830 Citrullus lanatus
COL.COLO4_24780 Corchorus olitorius
Cpa.g.sc3.32 Carica papaya
CsaV3_4G002370 Cucumis sativus L.
CSS0019438 Camellia sinensis var. sinensis
CSS0038820 Camellia sinensis var. sinensis
DCAR_010640 Daucus carota
Dinv28352 Davidia involucrata
Duzib084G1243 Durio zibethinus
ECA248G2416 Erigeron canadensis
EL10Ac3g05366 Beta vulgaris
Eucgr.K00315 Eucalyptus grandis
FAN01G1865 Fragaria x ananassa
FAN03G0014 Fragaria x ananassa
FAN06G1427 Fragaria x ananassa
FAN06G3446 Fragaria x ananassa
FAN10G0387 Fragaria x ananassa
FAN10G2558 Fragaria x ananassa
FvH4_7g30790 Fragaria vesca
Glyma.16G069100 Glycine max
Gohir.A09G183200 Gossypium hirsutum
Gohir.D09G177900 Gossypium hirsutum
Gorai.006G200000 Gossypium raimondii
GSVIVG01028746001 Vitis vinifera
HanXRQChr01g0031161 Helianthus annuus
HanXRQChr11g0353671 Helianthus annuus
Haze_00092 Corylus avellana
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla
HPP92_005214 Vanilla planifolia
HPP92_005221 Vanilla planifolia
Hund11695 Selenicereus undatus
Lalb_Chr06g0161451 Lupinus albus
Lj2P929T12 Lonicera japonica
Lj3A914T79 Lonicera japonica
Lj3g0007394 Lotus japonicus
Lj3P914T60 Lonicera japonica
Lju188P3T29 Lonicera japonica
Lsat_1_v5_gn_1_45000 Lactuca sativa
Lsat_1_v5_gn_5_90621 Lactuca sativa
Manes.06G155900 Manihot esculenta
Mapoly0039s0001 Marchantia polymorpha
MBI06_g04292_MAGBIO Magnolia biondii
MBI16_g03131_MAGBIO Magnolia biondii
MBI16_g03132_MAGBIO Magnolia biondii
MD01G1213200 Malus domestica
MD01G1213400 Malus domestica
MD07G1283200 Malus domestica
Medtr8g058270 Medicago truncatula
MELO3C017804.2 Cucumis melo
Migut.F00255 Erythranthe guttata
MSTRG.27056 Avicennia marina
MSTRG.8687 Avicennia marina
Nitab4.5_0000472g0110 Nicotiana tabacum
Nitab4.5_0001331g0120 Nicotiana tabacum
Nn1g01775 Nelumbo nucifera
Oeu037117.2 Olea europaea
Os01g0222300 Oryza sativa ssp. japonica
Peaxi162Scf00904g00464 Petunia axillaris
PGR142G3228 Punica granatum
PGSC0003DMG400006595 Solanum tuberosum
Phvul.011G167400 Phaseolus vulgaris
Potri.012G033800 Populus trichocarpa
Pp3c15_13500 Physcomitrium patens
Prupe.2G305400 Prunus persica
Psat0s2250g0040 Pisum sativum
Psat4g140280 Pisum sativum
PSO135G0324 Papaver somniferum
PSO384G4812 Papaver somniferum
QL09p011597 Quercus lobata
RcHm_v2.0_Chr1g0379731 Rosa chinensis
RcHm_v2.0_Chr1g0379741 Rosa chinensis
Rhsim03G0197100 Rhododendron simsii
Sabra12G0022900 Salix brachista
SalBow4G2744 Salvia bowleyana
SalBow4G2908 Salvia bowleyana
Sc13g0009450 Simmondsia chinensis
Sed0011275 Sechium edule
SEGI_30168 Sequoiadendron giganteum
SEGI_32546 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40596 Striga asiatica
SHI10811 Sapria himalayana
SHI10812 Sapria himalayana
Solyc03g007550.4 Solanum lycopersicum
Sopen03g003510 Solanum pennellii
Sp6g15110 Schrenkiella parvula
TAR629G0723 Trochodendron aralioides
TAR629G3278 Trochodendron aralioides
TAR636G3648 Trochodendron aralioides
THA.LOC104825125 Tarenaya hassleriana
Thecc.03G190400 Theobroma cacao
Thhalv10012590m.g Eutrema salsugineum
TPR.G16464 Trifolium pratense
TWI39G1277 Tripterygium wilfordii
vmacro06588 Vaccinium macrocarpon
vmacro06589 Vaccinium macrocarpon
VMungo1127G0215 Vigna mungo
Zm00001eb119640 Zea mays

User provided reference genes

Program Settings