Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p08370 Brassica napus
Aa31LG8G10580 Aethionema arabicum
Actinidia34626 Actinidia chinensis
Actinidia35954 Actinidia chinensis
AL3G39020 Arabidopsis lyrata
Aqoxy2G03778 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU2AG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea
AT3G24200 Arabidopsis thaliana
ATR0787G156 Amborella trichopoda
Atru.chr4.1761 Acer truncatum
AUR62001295 Chenopodium quinoa
AUR62025680 Chenopodium quinoa
BcaB06g26566 Brassica carinata
BcaC06g35602 Brassica carinata
BolC5t35086H Brassica oleracea
BolC7t41801H Brassica oleracea
BraA07t28623Z Brassica rapa
C07p13070 Brassica napus
C09p75660 Brassica napus
CAN.G220.36 Capsicum annuum
CAN.G500.70 Capsicum annuum
CANSAT21G2364 Cannabis sativa
CARHR099990 Cardamine hirsuta
Carub.0003s2430 Capsella rubella
Ca_07402_v3 Cicer arietinum L.
Ca_29365_v3 Cicer arietinum L.
CBR_g34015 Chara braunii
CBR_g34017 Chara braunii
Cc03_g07370 Coffea canephora
CDE02G0375 Ceratophyllum demersum
Cfa022008 Carpinus fangiana
Ciclev10004754m.g Citrus clementina
CiPaw.02G067600 Carya illinoinensis
ClCG07G007730 Citrullus lanatus
COL.COLO4_20306 Corchorus olitorius
Cpa.g.sc59.105 Carica papaya
Cre02.g112850 Chlamydomonas reinhardtii
CsaV3_4G006210 Cucumis sativus L.
DCAR_030788 Daucus carota
Dinv38263 Davidia involucrata
Duzib151G0717 Durio zibethinus
Duzib212G0911 Durio zibethinus
ECA233G0503 Erigeron canadensis
EL10Ac7g18096 Beta vulgaris
Eucgr.H00086 Eucalyptus grandis
FAN04G0744 Fragaria x ananassa
FAN04G1715 Fragaria x ananassa
FAN08G1440 Fragaria x ananassa
FAN13G1424 Fragaria x ananassa
FAN13G2718 Fragaria x ananassa
FAN18G0472 Fragaria x ananassa
FvH4_5g03680 Fragaria vesca
Glyma.08G345200 Glycine max
Gohir.A09G202800 Gossypium hirsutum
Gohir.D09G196900 Gossypium hirsutum
Gohir.D09G197033 Gossypium hirsutum
Gorai.006G220300 Gossypium raimondii
GSVIVG01012536001 Vitis vinifera
HanXRQChr10g0278391 Helianthus annuus
Haze_11577 Corylus avellana
Haze_11578 Corylus avellana
HPP92_019865 Vanilla planifolia
Hund05658 Selenicereus undatus
Lalb_Chr03g0041191 Lupinus albus
Lalb_Chr19g0126031 Lupinus albus
Lj1g0020537 Lotus japonicus
Lj3A565G17 Lonicera japonica
Lj3A565T20 Lonicera japonica
Lj3A566G16 Lonicera japonica
Lj3A577G5 Lonicera japonica
Lj3A578G7 Lonicera japonica
Lj3A578G8 Lonicera japonica
Lj3A579T16 Lonicera japonica
Lj3A579T17 Lonicera japonica
Lj3A580T64 Lonicera japonica
Lj3C565G3 Lonicera japonica
Lj5g0018216 Lotus japonicus
Lsat_1_v5_gn_2_43080 Lactuca sativa
Manes.03G149700 Manihot esculenta
Mapoly0028s0013 Marchantia polymorpha
MBI10_g16825_MAGBIO Magnolia biondii
MCO15G051 Micromonas commoda
MD06G1096300 Malus domestica
MD14G1116500 Malus domestica
Medtr2g060550 Medicago truncatula
Medtr7g051960 Medicago truncatula
MELO3C016329.2 Cucumis melo
Migut.G00632 Erythranthe guttata
MSTRG.9830 Avicennia marina
Nitab4.5_0000306g0020 Nicotiana tabacum
Nitab4.5_0004881g0030 Nicotiana tabacum
Nn8g40056 Nelumbo nucifera
Oeu026858.1 Olea europaea
Os03g0839100 Oryza sativa ssp. japonica
Peaxi162Scf00047g01039 Petunia axillaris
PGR142G3770 Punica granatum
PGSC0003DMG400029626 Solanum tuberosum
Phvul.008G135500 Phaseolus vulgaris
Potri.001G051200 Populus trichocarpa
Pp3c26_12110 Physcomitrium patens
PRCOL_00000308 Prasinoderma coloniale
Prupe.5G110900 Prunus persica
Psat3g151840 Pisum sativum
Psat7g176120 Pisum sativum
PSO017G4123 Papaver somniferum
PSO063G3796 Papaver somniferum
QL09p050425 Quercus lobata
RcHm_v2.0_Chr7g0196051 Rosa chinensis
Rhsim09G0051500 Rhododendron simsii
Sabra01G0035800 Salix brachista
SalBow2G0189 Salvia bowleyana
Sc24g0002560 Simmondsia chinensis
Sed0009691 Sechium edule
SEGI_35699 Sequoiadendron giganteum
SGA_v2.0_scaffold380G50374 Striga asiatica
SGA_v2.0_scaffold57G20149 Striga asiatica
SHI00938 Sapria himalayana
SMO351G0576 Selaginella moellendorffii
Solyc09g091570.2 Solanum lycopersicum
Sopen09g034490 Solanum pennellii
Sp3g21750 Schrenkiella parvula
SpUn0001_0240 Schrenkiella parvula
SpUn0001_0260 Schrenkiella parvula
SpUn0242_NC2199 Schrenkiella parvula
TAR636G3130 Trochodendron aralioides
THA.LOC104821613 Tarenaya hassleriana
Thecc.04G209900 Theobroma cacao
Thhalv10002522m.g Eutrema salsugineum
TPR.G26848 Trifolium pratense
TWI53G0062 Tripterygium wilfordii
unitig_32.g10868 Utricularia gibba
vmacro00503 Vaccinium macrocarpon
Zm00001eb211070 Zea mays

User provided reference genes

Program Settings