Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13490 Brassica napus
Aa31LG2G630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4561 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4613 Anthoceros agrestis
Actinidia02032 Actinidia chinensis
Actinidia14531 Actinidia chinensis
Actinidia14532 Actinidia chinensis
Ah.04g153420 Amaranthus hybridus
Ah.13g075060 Amaranthus hybridus
AL2G12350 Arabidopsis lyrata
Aqoxy5G03881 Aquilegia oxysepala
Aqoxy7G00414 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.414R5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YYBF8M Arachis hypogaea
AT1G63160 Arabidopsis thaliana
ATR0757G019 Amborella trichopoda
Atru.chr9.1557 Acer truncatum
AUR62010636 Chenopodium quinoa
AUR62017279 Chenopodium quinoa
BcaB03g13874 Brassica carinata
BcaC02g10395 Brassica carinata
BcaC04g22716 Brassica carinata
BcaC06g31939 Brassica carinata
BolC9t54514H Brassica oleracea
BraA09t37000Z Brassica rapa
C04p29400 Brassica napus
C09p15990 Brassica napus
CAN.G981.14 Capsicum annuum
CANSAT25G2010 Cannabis sativa
CARHR048340 Cardamine hirsuta
Carub.0002s0177 Capsella rubella
Ca_26106_v3 Cicer arietinum L.
CBR_g10932 Chara braunii
Cc08_g14150 Coffea canephora
CDE06G1381 Ceratophyllum demersum
CDE08G1049 Ceratophyllum demersum
Cfa012117 Carpinus fangiana
Cfa023452 Carpinus fangiana
Ciclev10021080m.g Citrus clementina
CiPaw.11G139800 Carya illinoinensis
ClCG00G000260 Citrullus lanatus
ClCG00G003620 Citrullus lanatus
ClCG10G003520 Citrullus lanatus
COL.COLO4_05257 Corchorus olitorius
Cpa.g.sc74.70 Carica papaya
Cre07.g337150 Chlamydomonas reinhardtii
CsaV3_3G003530 Cucumis sativus L.
CSS0001654 Camellia sinensis var. sinensis
CSS0032986 Camellia sinensis var. sinensis
DCAR_006126 Daucus carota
DCAR_006127 Daucus carota
DCAR_019129 Daucus carota
Dinv37676 Davidia involucrata
Dinv38996 Davidia involucrata
Dinv38997 Davidia involucrata
Duzib068G0329 Durio zibethinus
ECA246G0547 Erigeron canadensis
EL10Ac5g12744 Beta vulgaris
Eucgr.D01911 Eucalyptus grandis
FAN04G2109 Fragaria x ananassa
FAN08G2896 Fragaria x ananassa
FAN13G0597 Fragaria x ananassa
FAN18G1742 Fragaria x ananassa
FvH4_5g01730 Fragaria vesca
Glyma.05G048900 Glycine max
Glyma.17G130800 Glycine max
Gohir.A03G018100 Gossypium hirsutum
Gohir.D03G153500 Gossypium hirsutum
Gorai.003G161100 Gossypium raimondii
GSVIVG01019825001 Vitis vinifera
HanXRQChr06g0165451 Helianthus annuus
Haze_08933 Corylus avellana
Haze_26586 Corylus avellana
Haze_27338 Corylus avellana
Hma1.2p1_0371F.1_g138060 Hydrangea macrophylla
HPP92_025581 Vanilla planifolia
HPP92_025584 Vanilla planifolia
Hund11517 Selenicereus undatus
Lalb_Chr09g0333241 Lupinus albus
Lj2A194T57 Lonicera japonica
Lj4g0008217 Lotus japonicus
Lsat_1_v5_gn_3_5320 Lactuca sativa
Manes.02G025701 Manihot esculenta
Mapoly0016s0108 Marchantia polymorpha
MBI12_g43906_MAGBIO Magnolia biondii
MCO01G698 Micromonas commoda
MD04G1065200 Malus domestica
Medtr4g102700 Medicago truncatula
Medtr4g102860 Medicago truncatula
MELO3C014020.2 Cucumis melo
Migut.A00936 Erythranthe guttata
MSTRG.13828 Avicennia marina
Nitab4.5_0003924g0060 Nicotiana tabacum
Nitab4.5_0004097g0030 Nicotiana tabacum
Nitab4.5_0005213g0030 Nicotiana tabacum
Nn6g34210 Nelumbo nucifera
Oeu062741.1 Olea europaea
Os04g0569000 Oryza sativa ssp. japonica
Peaxi162Scf00714g00327 Petunia axillaris
PGR031G1951 Punica granatum
PGSC0003DMG400003051 Solanum tuberosum
Phvul.003G211700 Phaseolus vulgaris
Potri.003G123200 Populus trichocarpa
Pp3c16_21800 Physcomitrium patens
PRCOL_00002254 Prasinoderma coloniale
Prupe.8G039600 Prunus persica
Psat4g066840 Pisum sativum
PSO478G2732 Papaver somniferum
PSO782G0171 Papaver somniferum
QL12p017541 Quercus lobata
RcHm_v2.0_Chr7g0198991 Rosa chinensis
Rhsim07G0093500 Rhododendron simsii
Sabra03G0086900 Salix brachista
SalBow1G8365 Salvia bowleyana
Sc01g0008690 Simmondsia chinensis
Sed0016995 Sechium edule
SEGI_01081 Sequoiadendron giganteum
SEGI_05683 Sequoiadendron giganteum
SGA_v2.0_scaffold385G50457 Striga asiatica
SHI07200 Sapria himalayana
SHI07202 Sapria himalayana
SMO118G0101 Selaginella moellendorffii
Solyc08g080510.4 Solanum lycopersicum
Sopen08g028830 Solanum pennellii
Sp2g01430 Schrenkiella parvula
TAR636G0908 Trochodendron aralioides
THA.LOC104809417 Tarenaya hassleriana
Thecc.03G272700 Theobroma cacao
Thhalv10023584m.g Eutrema salsugineum
TPR.G19233 Trifolium pratense
TWI60G0010 Tripterygium wilfordii
unitig_26.g9708 Utricularia gibba
vmacro13929 Vaccinium macrocarpon
vmacro13930 Vaccinium macrocarpon
VMungo1215G1489 Vigna mungo
Zm00001eb428750 Zea mays

User provided reference genes

Program Settings