Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21690 Brassica napus
A09p43960 Brassica napus
Aa31LG1G15100 Aethionema arabicum
Aa31LG4G18970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1727 Anthoceros agrestis
Actinidia19186 Actinidia chinensis
Ah.03g140850 Amaranthus hybridus
AL8G23360 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea
AT3G50850 Arabidopsis thaliana
AT5G49560 Arabidopsis thaliana
ATR0772G168 Amborella trichopoda
Atru.chr3.573 Acer truncatum
AUR62004051 Chenopodium quinoa
AUR62007566 Chenopodium quinoa
BcaB01g00573 Brassica carinata
BcaC07g39550 Brassica carinata
BcaC09g50274 Brassica carinata
BcaC09g50280 Brassica carinata
BcaNung00242 Brassica carinata
BolC1t02652H Brassica oleracea
BolC8t50224H Brassica oleracea
BraA01t02078Z Brassica rapa
BraA09t39853Z Brassica rapa
C01p27040 Brassica napus
C08p26060 Brassica napus
CAN.G358.85 Capsicum annuum
CAN.G468.9 Capsicum annuum
CANSAT01G0942 Cannabis sativa
CARHR160400 Cardamine hirsuta
CARHR281190 Cardamine hirsuta
Carub.0005s1724 Capsella rubella
Carub.0008s2796 Capsella rubella
Ca_22266_v3 Cicer arietinum L.
Ca_22280_v3 Cicer arietinum L.
CBR_g3620 Chara braunii
Cc06_g21220 Coffea canephora
CDE02G2571 Ceratophyllum demersum
Cfa004307 Carpinus fangiana
Cfa026553 Carpinus fangiana
Ciclev10026228m.g Citrus clementina
CiPaw.01G038100 Carya illinoinensis
ClCG01G019540 Citrullus lanatus
COL.COLO4_22080 Corchorus olitorius
Cpa.g.sc6.112 Carica papaya
Cre16.g667200 Chlamydomonas reinhardtii
Cre16.g669400 Chlamydomonas reinhardtii
Cre16.g670900 Chlamydomonas reinhardtii
CsaV3_6G046230 Cucumis sativus L.
CSS0028163 Camellia sinensis var. sinensis
DCAR_025564 Daucus carota
DCAR_025565 Daucus carota
DCAR_025942 Daucus carota
Dinv39987 Davidia involucrata
Duzib147G0715 Durio zibethinus
ECA232G2278 Erigeron canadensis
EL10Ac6g15562 Beta vulgaris
Eucgr.H01270 Eucalyptus grandis
Eucgr.L02813 Eucalyptus grandis
FAN19G0062 Fragaria x ananassa
FAN23G0294 Fragaria x ananassa
FAN26G2780 Fragaria x ananassa
FAN28G0162 Fragaria x ananassa
FvH4_1g13310 Fragaria vesca
Glyma.02G057000 Glycine max
Gohir.A02G165300 Gossypium hirsutum
Gohir.A11G184300 Gossypium hirsutum
Gohir.D03G014700 Gossypium hirsutum
Gohir.D11G190800 Gossypium hirsutum
Gorai.003G015000 Gossypium raimondii
Gorai.007G203300 Gossypium raimondii
HanXRQChr09g0261461 Helianthus annuus
Haze_15089 Corylus avellana
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla
HPP92_019510 Vanilla planifolia
Lalb_Chr16g0388501 Lupinus albus
Lj2P453T29 Lonicera japonica
LjContig00448g0024692 Lotus japonicus
Lsat_1_v5_gn_4_152101 Lactuca sativa
Manes.01G135600 Manihot esculenta
Mapoly0123s0005 Marchantia polymorpha
MBI03_g28536_MAGBIO Magnolia biondii
MCO11G671 Micromonas commoda
MCO11G773 Micromonas commoda
MCO13G094 Micromonas commoda
MCO16G358 Micromonas commoda
MD02G1147500 Malus domestica
MD15G1261800 Malus domestica
Medtr8g077610 Medicago truncatula
MELO3C007826.2 Cucumis melo
Migut.H00989 Erythranthe guttata
Migut.L00520 Erythranthe guttata
Nitab4.5_0000178g0070 Nicotiana tabacum
Nitab4.5_0001385g0030 Nicotiana tabacum
Nn2g12315 Nelumbo nucifera
Oeu009414.1 Olea europaea
Oeu033645.1 Olea europaea
Oeu041446.1 Olea europaea
Oeu042263.1 Olea europaea
Os07g0569500 Oryza sativa ssp. japonica
Peaxi162Scf00366g10014 Petunia axillaris
PGR102G2535 Punica granatum
PGSC0003DMG400003597 Solanum tuberosum
Phvul.003G253400 Phaseolus vulgaris
Potri.007G025600 Populus trichocarpa
Pp3c1_38340 Physcomitrium patens
PRCOL_00003780 Prasinoderma coloniale
Prupe.7G154600 Prunus persica
Psat4g079800 Pisum sativum
Psat4g092640 Pisum sativum
PSO210G3110 Papaver somniferum
PSO731G0124 Papaver somniferum
QL06p046093 Quercus lobata
RcHm_v2.0_Chr2g0101571 Rosa chinensis
Sabra07G0022600 Salix brachista
SalBow5G4467 Salvia bowleyana
Sed0020674 Sechium edule
SEGI_16522 Sequoiadendron giganteum
SMO364G0506 Selaginella moellendorffii
Solyc02g085210.1 Solanum lycopersicum
Sopen02g029910 Solanum pennellii
Sp7g14210 Schrenkiella parvula
TAR625G0490 Trochodendron aralioides
THA.LOC104821292 Tarenaya hassleriana
THA.LOC104821296 Tarenaya hassleriana
THA.LOC109115976 Tarenaya hassleriana
Thecc.01G035800 Theobroma cacao
Thhalv10010630m.g Eutrema salsugineum
Thhalv10027491m.g Eutrema salsugineum
TPR.G24140 Trifolium pratense
TWI53G0229 Tripterygium wilfordii
unitig_32.g11368 Utricularia gibba
vmacro17831 Vaccinium macrocarpon
VMungo0251G0356 Vigna mungo
Zm00001eb324730 Zea mays

User provided reference genes

Program Settings