Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12930 Brassica napus
Aa31sc192G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3323 Anthoceros agrestis
Actinidia00145 Actinidia chinensis
Actinidia01643 Actinidia chinensis
Actinidia11733 Actinidia chinensis
Actinidia25324 Actinidia chinensis
Ah.02g128480 Amaranthus hybridus
AL8G23780 Arabidopsis lyrata
Aqoxy6G00017 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.551JVB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QHFI3V Arachis hypogaea
AT5G49810 Arabidopsis thaliana
ATR1089G010 Amborella trichopoda
Atru.chr6.195 Acer truncatum
AUR62032480 Chenopodium quinoa
AUR62042248 Chenopodium quinoa
BcaB05g24066 Brassica carinata
BcaC03g14666 Brassica carinata
BolC2t08245H Brassica oleracea
BraA02t06347Z Brassica rapa
C02p21040 Brassica napus
CAN.G855.61 Capsicum annuum
CANSAT01G1628 Cannabis sativa
CARHR258960 Cardamine hirsuta
Carub.0008s0969 Capsella rubella
Ca_00015_v3 Cicer arietinum L.
Cc02_g23660 Coffea canephora
CDE04G0097 Ceratophyllum demersum
CDE07G1039 Ceratophyllum demersum
Cfa004427 Carpinus fangiana
Ciclev10000109m.g Citrus clementina
Ciclev10003598m.g Citrus clementina
CiPaw.05G001100 Carya illinoinensis
ClCG10G007520 Citrullus lanatus
COL.COLO4_31108 Corchorus olitorius
Cpa.g.sc173.3 Carica papaya
CsaV3_3G006730 Cucumis sativus L.
CSS0006349 Camellia sinensis var. sinensis
CSS0029934 Camellia sinensis var. sinensis
CSS0043519 Camellia sinensis var. sinensis
DCAR_001729 Daucus carota
Dinv29639 Davidia involucrata
Dinv29684 Davidia involucrata
Dinv29685 Davidia involucrata
Duzib192G0099 Durio zibethinus
ECA236G1140 Erigeron canadensis
EL10Ac6g13966 Beta vulgaris
Eucgr.G00060 Eucalyptus grandis
FAN08G1900 Fragaria x ananassa
FAN13G2214 Fragaria x ananassa
FAN18G1053 Fragaria x ananassa
FvH4_5g27550 Fragaria vesca
Glyma.12G163700 Glycine max
Glyma.16G000200 Glycine max
Gohir.A05G109500 Gossypium hirsutum
Gohir.A06G115700 Gossypium hirsutum
Gohir.D05G109900 Gossypium hirsutum
Gohir.D06G122900 Gossypium hirsutum
Gorai.009G114000 Gossypium raimondii
Gorai.010G143100 Gossypium raimondii
GSVIVG01023133001 Vitis vinifera
HanXRQChr04g0109261 Helianthus annuus
HanXRQChr15g0469711 Helianthus annuus
Haze_09967 Corylus avellana
Hma1.2p1_3305F.1_g335100 Hydrangea macrophylla
HPP92_001968 Vanilla planifolia
HPP92_002029 Vanilla planifolia
HPP92_002030 Vanilla planifolia
Hund15344 Selenicereus undatus
Lalb_Chr18g0061151 Lupinus albus
Lj2g0027017 Lotus japonicus
Lj5A286G23 Lonicera japonica
Lj5A286G24 Lonicera japonica
Lj9C258G8 Lonicera japonica
Lsat_1_v5_gn_9_125160 Lactuca sativa
Lsat_1_v5_gn_9_83520 Lactuca sativa
Manes.07G031400 Manihot esculenta
Manes.10G105800 Manihot esculenta
Mapoly0008s0067 Marchantia polymorpha
MBI03_g21084_MAGBIO Magnolia biondii
MD08G1249200 Malus domestica
MD15G1443800 Malus domestica
Medtr2g005110 Medicago truncatula
MELO3C016448.2 Cucumis melo
Migut.B00709 Erythranthe guttata
Migut.N00867 Erythranthe guttata
MSTRG.27885 Avicennia marina
Nitab4.5_0003247g0030 Nicotiana tabacum
Nitab4.5_0005164g0050 Nicotiana tabacum
Nn5g27142 Nelumbo nucifera
Oeu016644.1 Olea europaea
Oeu043598.1 Olea europaea
Os05g0105000 Oryza sativa ssp. japonica
Peaxi162Scf00011g02119 Petunia axillaris
PGR042G1044 Punica granatum
PGSC0003DMG400020720 Solanum tuberosum
Phvul.006G221800 Phaseolus vulgaris
Potri.004G229800 Populus trichocarpa
Pp3c11_2820 Physcomitrium patens
Pp3c11_2824 Physcomitrium patens
Pp3c2_34390 Physcomitrium patens
Prupe.1G586400 Prunus persica
Psat1g223680 Pisum sativum
PSO210G3401 Papaver somniferum
PSO447G0289 Papaver somniferum
PSO528G0147 Papaver somniferum
QL02p103637 Quercus lobata
RcHm_v2.0_Chr7g0218921 Rosa chinensis
Rhsim11G0117400 Rhododendron simsii
Rhsim11G0165900 Rhododendron simsii
Sabra01G0175000 Salix brachista
SalBow4G1427 Salvia bowleyana
Sc03g0005740 Simmondsia chinensis
Sed0014048 Sechium edule
Sed0016889 Sechium edule
SEGI_21259 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29554 Striga asiatica
SGA_v2.0_scaffold8G04464 Striga asiatica
SGA_v2.0_scaffold8G04465 Striga asiatica
SMO301G0051 Selaginella moellendorffii
Solyc01g102940.3 Solanum lycopersicum
Sopen01g045350 Solanum pennellii
Sp6g11200 Schrenkiella parvula
TAR381G0848 Trochodendron aralioides
THA.LOC104800334 Tarenaya hassleriana
THA.LOC104809041 Tarenaya hassleriana
Thecc.06G020600 Theobroma cacao
Thhalv10028379m.g Eutrema salsugineum
TPR.G5956 Trifolium pratense
TWI23G0559 Tripterygium wilfordii
vmacro19822 Vaccinium macrocarpon
vmacro23029 Vaccinium macrocarpon
vmacro23188 Vaccinium macrocarpon
VMungo0540G1526 Vigna mungo
Zm00001eb356170 Zea mays

User provided reference genes

Program Settings