Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14150 Brassica napus
A07p32630 Brassica napus
A10p10750 Brassica napus
Aa31LG2G15630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis
Actinidia09628 Actinidia chinensis
Ah.03g135990 Amaranthus hybridus
AL2G25840 Arabidopsis lyrata
Aqoxy5G03309 Aquilegia oxysepala
Aqoxy7G01339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea
AT1G67320 Arabidopsis thaliana
ATR0561G025 Amborella trichopoda
Atru.chr11.2352 Acer truncatum
Atru.chr11.2353 Acer truncatum
Atru.chr11.2354 Acer truncatum
AUR62005646 Chenopodium quinoa
AUR62028904 Chenopodium quinoa
BcaB03g15345 Brassica carinata
BcaB05g24262 Brassica carinata
BcaC03g14832 Brassica carinata
BolC2t08435H Brassica oleracea
BraA02t06478Z Brassica rapa
BraA07t30887Z Brassica rapa
C02p22860 Brassica napus
CAN.G97.33 Capsicum annuum
CANSAT01G0699 Cannabis sativa
CARHR059800 Cardamine hirsuta
Carub.0002s1360 Capsella rubella
Ca_18016_v3 Cicer arietinum L.
CBR_g45479 Chara braunii
Cc11_g17150 Coffea canephora
CDE05G3041 Ceratophyllum demersum
Cfa009383 Carpinus fangiana
Ciclev10031511m.g Citrus clementina
CiPaw.06G104800 Carya illinoinensis
ClCG06G002100 Citrullus lanatus
COL.COLO4_20442 Corchorus olitorius
Cpa.g.sc43.82 Carica papaya
Cre06.g293000 Chlamydomonas reinhardtii
CsaV3_6G008170 Cucumis sativus L.
CSS0033060 Camellia sinensis var. sinensis
CSS0039862 Camellia sinensis var. sinensis
DCAR_024669 Daucus carota
Dinv11687 Davidia involucrata
Dinv17584 Davidia involucrata
Duzib248G1391 Durio zibethinus
Duzib268G0110 Durio zibethinus
ECA233G0246 Erigeron canadensis
EL10Ac6g13532 Beta vulgaris
Eucgr.H04616 Eucalyptus grandis
FAN07G0551 Fragaria x ananassa
FAN12G2046 Fragaria x ananassa
FAN22G0128 Fragaria x ananassa
FvH4_4g14550 Fragaria vesca
Glyma.05G148900 Glycine max
Glyma.08G105600 Glycine max
Gohir.A03G117000 Gossypium hirsutum
Gohir.D02G146900 Gossypium hirsutum
Gorai.005G164500 Gossypium raimondii
GSVIVG01029087001 Vitis vinifera
HanXRQChr12g0354651 Helianthus annuus
HanXRQChr12g0357271 Helianthus annuus
Haze_12444 Corylus avellana
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla
HPP92_020263 Vanilla planifolia
Hund25478 Selenicereus undatus
Lalb_Chr07g0187001 Lupinus albus
Lj4g0002319 Lotus japonicus
Lj6A829T30 Lonicera japonica
Lsat_1_v5_gn_0_16180 Lactuca sativa
Lsat_1_v5_gn_2_63520 Lactuca sativa
Manes.12G008900 Manihot esculenta
Manes.13G009300 Manihot esculenta
Mapoly0051s0085 Marchantia polymorpha
MCO02G430 Micromonas commoda
MD09G1083700 Malus domestica
MD13G1121900 Malus domestica
MD16G1122100 Malus domestica
MD16G1122200 Malus domestica
Medtr8g097160 Medicago truncatula
MELO3C022319.2 Cucumis melo
Migut.K00987 Erythranthe guttata
MSTRG.487 Avicennia marina
Nitab4.5_0001010g0020 Nicotiana tabacum
Nitab4.5_0008235g0010 Nicotiana tabacum
Nn3g16413 Nelumbo nucifera
Oeu058914.1 Olea europaea
Os07g0406800 Oryza sativa ssp. japonica
Peaxi162Scf00128g01539 Petunia axillaris
Phvul.L003546 Phaseolus vulgaris
Potri.003G169300 Populus trichocarpa
Potri.017G053801 Populus trichocarpa
Pp3c17_16180 Physcomitrium patens
PRCOL_00003669 Prasinoderma coloniale
Prupe.1G223400 Prunus persica
Psat7g076760 Pisum sativum
Psat7g076800 Pisum sativum
PSO017G5787 Papaver somniferum
QL02p017501 Quercus lobata
QL03p051875 Quercus lobata
QL03p057485 Quercus lobata
RcHm_v2.0_Chr4g0417231 Rosa chinensis
RcHm_v2.0_Chr4g0417241 Rosa chinensis
RcHm_v2.0_Chr4g0417261 Rosa chinensis
RcHm_v2.0_Chr4g0418271 Rosa chinensis
Rhsim12G0094300 Rhododendron simsii
Sabra03G0124100 Salix brachista
SalBow2G2693 Salvia bowleyana
Sc11g0000360 Simmondsia chinensis
Sed0021319 Sechium edule
SEGI_29210 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31915 Striga asiatica
SHI17980 Sapria himalayana
SHI17981 Sapria himalayana
SHI17982 Sapria himalayana
SHI17983 Sapria himalayana
SMO340G0130 Selaginella moellendorffii
Solyc04g045530.4 Solanum lycopersicum
Sopen04g017360 Solanum pennellii
Sp5g22260 Schrenkiella parvula
TAR371G1028 Trochodendron aralioides
TAR629G1549 Trochodendron aralioides
THA.LOC104807138 Tarenaya hassleriana
THA.LOC104825491 Tarenaya hassleriana
Thecc.02G202700 Theobroma cacao
Thhalv10018528m.g Eutrema salsugineum
TPR.G26572 Trifolium pratense
TWI36G1278 Tripterygium wilfordii
TWI75G1135 Tripterygium wilfordii
unitig_699.g19962 Utricularia gibba
vmacro17973 Vaccinium macrocarpon
Zm00001eb407100 Zea mays
Zm00001eb421110 Zea mays

User provided reference genes

Program Settings