Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00350 Brassica napus
Aa31LG1G23000 Aethionema arabicum
Actinidia11571 Actinidia chinensis
Ah.12g058850 Amaranthus hybridus
AL6G10800 Arabidopsis lyrata
Aqoxy4G02493 Aquilegia oxysepala
Aqoxy4G02494 Aquilegia oxysepala
Aqoxy4G02495 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L30AV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F052KA Arachis hypogaea
AT5G01340 Arabidopsis thaliana
ATR0681G138 Amborella trichopoda
Atru.BG.221.p Acer truncatum
Atru.chr1.3799 Acer truncatum
AUR62030475 Chenopodium quinoa
AUR62030821 Chenopodium quinoa
BcaB01g06224 Brassica carinata
BolC3t12617H Brassica oleracea
BraA03t09426Z Brassica rapa
C03p00510 Brassica napus
CAN.G243.19 Capsicum annuum
CANSAT35G1945 Cannabis sativa
CARHR211700 Cardamine hirsuta
Carub.0006s0048 Capsella rubella
Ca_05376_v3 Cicer arietinum L.
CBR_g49636 Chara braunii
Cc03_g13790 Coffea canephora
Cc11_g00480 Coffea canephora
CDE06G0909 Ceratophyllum demersum
CDE12G0752 Ceratophyllum demersum
Cfa000488 Carpinus fangiana
Cfa024786 Carpinus fangiana
Ciclev10012248m.g Citrus clementina
CiPaw.09G211400 Carya illinoinensis
ClCG10G022310 Citrullus lanatus
Cpa.g.sc2485.1 Carica papaya
Cre06.g260200 Chlamydomonas reinhardtii
Cre09.g399326 Chlamydomonas reinhardtii
Cre10.g449100 Chlamydomonas reinhardtii
CsaV3_3G033570 Cucumis sativus L.
CSS0022761 Camellia sinensis var. sinensis
DCAR_028862 Daucus carota
DCAR_028863 Daucus carota
Dinv05777 Davidia involucrata
Dinv16899 Davidia involucrata
Duzib084G1089 Durio zibethinus
ECA238G1930 Erigeron canadensis
EL10Ac5g12535 Beta vulgaris
Eucgr.A00536 Eucalyptus grandis
Eucgr.A00542 Eucalyptus grandis
FAN05G0431 Fragaria x ananassa
FAN09G3983 Fragaria x ananassa
FAN14G2346 Fragaria x ananassa
FAN14G5957 Fragaria x ananassa
FvH4_6g11130 Fragaria vesca
Glyma.02G211700 Glycine max
Glyma.14G179300 Glycine max
Gohir.A09G174600 Gossypium hirsutum
Gohir.A10G196500 Gossypium hirsutum
Gohir.D09G171650 Gossypium hirsutum
Gohir.D10G203600 Gossypium hirsutum
Gorai.006G193400 Gossypium raimondii
Gorai.011G228400 Gossypium raimondii
GSVIVG01003933001 Vitis vinifera
HanXRQChr08g0214861 Helianthus annuus
HanXRQChr09g0253711 Helianthus annuus
HanXRQChr09g0253721 Helianthus annuus
HanXRQChr16g0521221 Helianthus annuus
Haze_21027 Corylus avellana
HPP92_012032 Vanilla planifolia
HPP92_012033 Vanilla planifolia
Hund14880 Selenicereus undatus
Lalb_Chr04g0251411 Lupinus albus
Lalb_Chr17g0346091 Lupinus albus
Lalb_Chr17g0346101 Lupinus albus
Lj1g0007203 Lotus japonicus
Lj2A71T59 Lonicera japonica
Lsat_1_v5_gn_5_149600 Lactuca sativa
Manes.08G094100 Manihot esculenta
Mapoly0001s0082 Marchantia polymorpha
MBI15_g07345_MAGBIO Magnolia biondii
MD00G1062100 Malus domestica
MD12G1172100 Malus domestica
Medtr4g057850 Medicago truncatula
MELO3C009147.2 Cucumis melo
Migut.J00136 Erythranthe guttata
MSTRG.18994 Avicennia marina
MSTRG.5564 Avicennia marina
Nitab4.5_0000770g0070 Nicotiana tabacum
Nitab4.5_0004107g0020 Nicotiana tabacum
Nn2g10896 Nelumbo nucifera
Os03g0292200 Oryza sativa ssp. japonica
Peaxi162Scf00009g01535 Petunia axillaris
PGR031G2785 Punica granatum
PGSC0003DMG400011025 Solanum tuberosum
Phvul.008G178900 Phaseolus vulgaris
Phvul.011G011300 Phaseolus vulgaris
Potri.016G119500 Populus trichocarpa
Potri.016G119650 Populus trichocarpa
Pp3c11_24700 Physcomitrium patens
Pp3c3_25290 Physcomitrium patens
PRCOL_00000280 Prasinoderma coloniale
Prupe.2G034900 Prunus persica
Prupe.6G280400 Prunus persica
Psat0s2362g0040 Pisum sativum
PSO339G5837 Papaver somniferum
PSO384G4971 Papaver somniferum
QL07p035036 Quercus lobata
RcHm_v2.0_Chr3g0462571 Rosa chinensis
Rhsim04G0103700 Rhododendron simsii
Rhsim04G0104200 Rhododendron simsii
Sabra16G0115400 Salix brachista
SalBow5G0195 Salvia bowleyana
SalBow5G2160 Salvia bowleyana
Sc22g0002550 Simmondsia chinensis
Sc22g0002560 Simmondsia chinensis
Sed0006450 Sechium edule
Sed0017323 Sechium edule
SEGI_05711 Sequoiadendron giganteum
SHI12849 Sapria himalayana
SMO002G0006 Selaginella moellendorffii
SMO356G0213 Selaginella moellendorffii
Solyc10g085220.3 Solanum lycopersicum
Sopen10g034700 Solanum pennellii
Sp6g40650 Schrenkiella parvula
THA.LOC104823292 Tarenaya hassleriana
THA.LOC104827047 Tarenaya hassleriana
Thecc.03G046600 Theobroma cacao
Thhalv10014166m.g Eutrema salsugineum
TPR.G11802 Trifolium pratense
TWI74G0181 Tripterygium wilfordii
TWI77G0395 Tripterygium wilfordii
unitig_699.g19378 Utricularia gibba
vmacro20297 Vaccinium macrocarpon
VMungo0647G1306 Vigna mungo
Zm00001eb013460 Zea mays

User provided reference genes

Program Settings