Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p39820 Brassica napus
Aa31LG4G4260 Aethionema arabicum
Aa31sc79G90 Aethionema arabicum
AL2G27750 Arabidopsis lyrata
AL2G33800 Arabidopsis lyrata
Aqoxy3G00384 Aquilegia oxysepala
Aqoxy3G03898 Aquilegia oxysepala
AT1G68795 Arabidopsis thaliana
AT1G73965 Arabidopsis thaliana
ATR0681G007 Amborella trichopoda
Atru.chr11.1371 Acer truncatum
Atru.chr9.746 Acer truncatum
BcaB03g15849 Brassica carinata
BcaB05g24412 Brassica carinata
BcaC03g14990 Brassica carinata
BcaC08g46328 Brassica carinata
BcaC08g46825 Brassica carinata
BolC6t39316H Brassica oleracea
BolC6t39843H Brassica oleracea
BraA07t31528Z Brassica rapa
C06p48080 Brassica napus
CANSAT64G1761 Cannabis sativa
CARHR061620 Cardamine hirsuta
CARHR067080 Cardamine hirsuta
Carub.0002s1536 Capsella rubella
Carub.0002s2074 Capsella rubella
Cc11_g10680 Coffea canephora
Ciclev10033717m.g Citrus clementina
CiPaw.15G002700 Carya illinoinensis
CiPaw.15G126000 Carya illinoinensis
CiPaw.16G002600 Carya illinoinensis
CiPaw.16G083700 Carya illinoinensis
ClCG01G005730 Citrullus lanatus
COL.COLO4_07860 Corchorus olitorius
COL.COLO4_22708 Corchorus olitorius
Cpa.g.sc13.61 Carica papaya
CSS0007623 Camellia sinensis var. sinensis
Dinv36900 Davidia involucrata
Duzib205G0672 Durio zibethinus
Duzib248G0754 Durio zibethinus
Duzib251G0462 Durio zibethinus
Eucgr.B00694 Eucalyptus grandis
Eucgr.G02356 Eucalyptus grandis
FAN07G2890 Fragaria x ananassa
FAN12G1213 Fragaria x ananassa
FAN17G1568 Fragaria x ananassa
FAN18G0325 Fragaria x ananassa
FvH4_4g28190 Fragaria vesca
FvH4_5g12751 Fragaria vesca
Glyma.05G013600 Glycine max
Glyma.10G205100 Glycine max
Glyma.17G121800 Glycine max
Glyma.20G185400 Glycine max
Gohir.A03G097050 Gossypium hirsutum
Gohir.A07G038800 Gossypium hirsutum
Gohir.A11G007200 Gossypium hirsutum
Gohir.A13G071300 Gossypium hirsutum
Gohir.D02G116175 Gossypium hirsutum
Gohir.D07G042900 Gossypium hirsutum
Gohir.D11G006300 Gossypium hirsutum
Gohir.D13G069300 Gossypium hirsutum
Gorai.001G045900 Gossypium raimondii
Gorai.007G007600 Gossypium raimondii
Gorai.013G079400 Gossypium raimondii
HanXRQChr05g0149681 Helianthus annuus
HanXRQChr16g0502081 Helianthus annuus
HanXRQChr16g0528861 Helianthus annuus
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla
Lalb_Chr07g0178581 Lupinus albus
Lalb_Chr10g0099661 Lupinus albus
Lalb_Chr13g0302361 Lupinus albus
Lalb_Chr21g0313371 Lupinus albus
Lj4g0025770 Lotus japonicus
Lj5g0018872 Lotus japonicus
Lsat_1_v5_gn_3_58221 Lactuca sativa
Lsat_1_v5_gn_4_112260 Lactuca sativa
Lsat_1_v5_gn_4_19200 Lactuca sativa
Manes.01G021100 Manihot esculenta
Manes.05G118800 Manihot esculenta
Manes.06G073000 Manihot esculenta
Manes.14G096700 Manihot esculenta
MBI16_g06255_MAGBIO Magnolia biondii
MD06G1210600 Malus domestica
MD14G1221300 Malus domestica
Medtr1g093800 Medicago truncatula
Medtr8g076990 Medicago truncatula
MELO3C005357.2 Cucumis melo
MELO3C017284.2 Cucumis melo
Migut.E00293 Erythranthe guttata
Migut.L01100 Erythranthe guttata
Nn3g17700 Nelumbo nucifera
Nn4g23710 Nelumbo nucifera
Oeu024099.1 Olea europaea
Oeu041876.1 Olea europaea
Oeu044626.1 Olea europaea
Os02g0324400 Oryza sativa ssp. japonica
PGR044G2006 Punica granatum
PGR119G1376 Punica granatum
PGSC0003DMG400000830 Solanum tuberosum
PGSC0003DMG400005703 Solanum tuberosum
Phvul.003G177600 Phaseolus vulgaris
Phvul.007G101800 Phaseolus vulgaris
Potri.008G115600 Populus trichocarpa
Potri.010G130400 Populus trichocarpa
Potri.012G059600 Populus trichocarpa
Prupe.1G304500 Prunus persica
Prupe.5G216700 Prunus persica
Psat4g043720 Pisum sativum
PSO017G0024 Papaver somniferum
QL01p001040 Quercus lobata
QL10p023002 Quercus lobata
RcHm_v2.0_Chr4g0435951 Rosa chinensis
Sabra08G0087500 Salix brachista
SalBow8G0077 Salvia bowleyana
Sc04g0003730 Simmondsia chinensis
Sc11g0003040 Simmondsia chinensis
Sed0000064 Sechium edule
Sed0012991 Sechium edule
SGA_v2.0_scaffold59G20629 Striga asiatica
Solyc05g009915.1 Solanum lycopersicum
Sopen03g038660 Solanum pennellii
Sopen05g005720 Solanum pennellii
Sp5g23900 Schrenkiella parvula
Sp5g29165 Schrenkiella parvula
TAR629G1032 Trochodendron aralioides
THA.LOC104821965 Tarenaya hassleriana
Thecc.02G362100 Theobroma cacao
Thecc.03G027700 Theobroma cacao
Thhalv10019343m.g Eutrema salsugineum
Thhalv10019753m.g Eutrema salsugineum
TPR.G26768 Trifolium pratense
TPR.G9813 Trifolium pratense
VMungo0720G2795 Vigna mungo
VMungo1215G1388 Vigna mungo
Zm00001eb119950 Zea mays
Zm00001eb338500 Zea mays

User provided reference genes

Program Settings