Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p45580 Brassica napus
Aa31LG9G6020 Aethionema arabicum
Aa31sc135G40 Aethionema arabicum
Aa31sc427G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2336 Anthoceros agrestis
Actinidia03357 Actinidia chinensis
Actinidia09179 Actinidia chinensis
Actinidia14788 Actinidia chinensis
Actinidia25982 Actinidia chinensis
Ah.12g055200 Amaranthus hybridus
AL8G11490 Arabidopsis lyrata
Aqoxy3G02278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95XRJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HL18KG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M4GMJK Arachis hypogaea
AT5G46840 Arabidopsis thaliana
ATR0665G143 Amborella trichopoda
Atru.chr6.1648 Acer truncatum
AUR62007307 Chenopodium quinoa
AUR62018696 Chenopodium quinoa
BcaC03g16894 Brassica carinata
BcaC03g16897 Brassica carinata
BcaC06g31440 Brassica carinata
BcaC06g34338 Brassica carinata
BolC2t10824H Brassica oleracea
BolC2t10828H Brassica oleracea
BolC7t43556H Brassica oleracea
BraA02t08058Z Brassica rapa
BraA06t27430Z Brassica rapa
C02p47920 Brassica napus
C02p47970 Brassica napus
C07p30200 Brassica napus
C09p29040 Brassica napus
CANSAT21G1200 Cannabis sativa
CARHR174610 Cardamine hirsuta
Carub.0008s0107 Capsella rubella
Ca_25196_v3 Cicer arietinum L.
CBR_g19667 Chara braunii
Cc08_g03160 Coffea canephora
CDE11G0708 Ceratophyllum demersum
CDE11G1012 Ceratophyllum demersum
Cfa024331 Carpinus fangiana
Ciclev10014807m.g Citrus clementina
CiPaw.11G095800 Carya illinoinensis
ClCG10G001470 Citrullus lanatus
COL.COLO4_16985 Corchorus olitorius
Cpa.g.c28481.1 Carica papaya
Cre16.g659150 Chlamydomonas reinhardtii
CsaV3_3G001550 Cucumis sativus L.
CSS0005386 Camellia sinensis var. sinensis
CSS0005944 Camellia sinensis var. sinensis
CSS0022331 Camellia sinensis var. sinensis
CSS0022748 Camellia sinensis var. sinensis
CSS0028579 Camellia sinensis var. sinensis
CSS0031650 Camellia sinensis var. sinensis
DCAR_008245 Daucus carota
Dinv25238 Davidia involucrata
Duzib205G1163 Durio zibethinus
ECA233G1178 Erigeron canadensis
EL10Ac5g12080 Beta vulgaris
Eucgr.D02212 Eucalyptus grandis
FAN04G1305 Fragaria x ananassa
FAN08G0023 Fragaria x ananassa
FAN13G0945 Fragaria x ananassa
FAN18G0707 Fragaria x ananassa
FAN18G2323 Fragaria x ananassa
FvH4_5g22460 Fragaria vesca
Glyma.01G016900 Glycine max
Glyma.09G205900 Glycine max
Gohir.A12G207500 Gossypium hirsutum
Gohir.D12G209900 Gossypium hirsutum
Gorai.008G225500 Gossypium raimondii
GSVIVG01013130001 Vitis vinifera
HanXRQChr04g0099011 Helianthus annuus
HanXRQChr13g0395441 Helianthus annuus
Haze_08190 Corylus avellana
Hma1.2p1_0303F.1_g118850 Hydrangea macrophylla
Hma1.2p1_0303F.1_g118860 Hydrangea macrophylla
HPP92_020907 Vanilla planifolia
Hund11224 Selenicereus undatus
Lalb_Chr05g0215901 Lupinus albus
Lalb_Chr16g0381251 Lupinus albus
Lj2A234T41 Lonicera japonica
Lj2g0023622 Lotus japonicus
Lj2P235T37 Lonicera japonica
Lsat_1_v5_gn_6_4021 Lactuca sativa
Manes.15G193000 Manihot esculenta
Mapoly0168s0008 Marchantia polymorpha
MBI04_g05750_MAGBIO Magnolia biondii
MCO09G223 Micromonas commoda
MD06G1037000 Malus domestica
MD16G1272400 Malus domestica
Medtr5g029900 Medicago truncatula
MELO3C013841.2 Cucumis melo
Migut.E00784 Erythranthe guttata
MSTRG.1990 Avicennia marina
Nitab4.5_0000353g0110 Nicotiana tabacum
Nitab4.5_0002203g0010 Nicotiana tabacum
Nn3g19446 Nelumbo nucifera
Os03g0854300 Oryza sativa ssp. japonica
Peaxi162Scf00170g01229 Petunia axillaris
PGR031G1299 Punica granatum
PGSC0003DMG400017545 Solanum tuberosum
Phvul.002G139900 Phaseolus vulgaris
Potri.001G140300 Populus trichocarpa
Potri.003G093900 Populus trichocarpa
Pp3c17_19260 Physcomitrium patens
PRCOL_00000761 Prasinoderma coloniale
Prupe.5G032300 Prunus persica
Psat2g137240 Pisum sativum
PSO063G4121 Papaver somniferum
PSO782G2687 Papaver somniferum
QL12p004713 Quercus lobata
RcHm_v2.0_Chr7g0210251 Rosa chinensis
Rhsim07G0129900 Rhododendron simsii
Rhsim11G0018700 Rhododendron simsii
Sabra01G0109200 Salix brachista
Sabra03G0063000 Salix brachista
Sc22g0001610 Simmondsia chinensis
Sed0009079 Sechium edule
SEGI_20635 Sequoiadendron giganteum
SEGI_27441 Sequoiadendron giganteum
SHI51348 Sapria himalayana
Solyc08g076660.3 Solanum lycopersicum
Sopen08g025210 Solanum pennellii
Sp2g11640 Schrenkiella parvula
TAR375G0838 Trochodendron aralioides
THA.LOC104806699 Tarenaya hassleriana
Thecc.03G305800 Theobroma cacao
Thhalv10000858m.g Eutrema salsugineum
TPR.G8114 Trifolium pratense
TWI60G0421 Tripterygium wilfordii
TWI81G0857 Tripterygium wilfordii
vmacro00310 Vaccinium macrocarpon
vmacro14185 Vaccinium macrocarpon
VMungo1215G2703 Vigna mungo
Zm00001eb210550 Zea mays

User provided reference genes

Program Settings