Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20250 Brassica napus
Aa31LG9G13380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.905 Anthoceros agrestis
Actinidia08039 Actinidia chinensis
Actinidia22136 Actinidia chinensis
Actinidia30611 Actinidia chinensis
Ah.03g135820 Amaranthus hybridus
AL8G17180 Arabidopsis lyrata
Aqoxy5G03240 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CX1ZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6DJZ7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9CR681 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LK9N17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MI1RE4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NHM7H0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE0XQG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T12W0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6CDUJ Arachis hypogaea
AT5G43280 Arabidopsis thaliana
ATR0582G102 Amborella trichopoda
Atru.chr11.2394 Acer truncatum
AUR62005679 Chenopodium quinoa
AUR62028876 Chenopodium quinoa
BcaB07g31019 Brassica carinata
BcaC04g21935 Brassica carinata
BcaC04g21936 Brassica carinata
BolC9t55470H Brassica oleracea
BraA09t37638Z Brassica rapa
C09p25670 Brassica napus
CAN.G206.147 Capsicum annuum
CAN.G254.3 Capsicum annuum
CAN.G254.5 Capsicum annuum
CANSAT01G0648 Cannabis sativa
CANSAT01G1614 Cannabis sativa
CARHR180490 Cardamine hirsuta
Carub.0008s0541 Capsella rubella
Ca_11430_v3 Cicer arietinum L.
Ca_29860_v3 Cicer arietinum L.
CBR_g50345 Chara braunii
Cc11_g17400 Coffea canephora
CDE05G0550 Ceratophyllum demersum
Cfa009408 Carpinus fangiana
Ciclev10032364m.g Citrus clementina
CiPaw.05G104900 Carya illinoinensis
CiPaw.06G106600 Carya illinoinensis
ClCG07G015310 Citrullus lanatus
COL.COLO4_17381 Corchorus olitorius
Cpa.g.sc99.61 Carica papaya
Cre10.g463150 Chlamydomonas reinhardtii
CsaV3_4G002910 Cucumis sativus L.
CSS0027356 Camellia sinensis var. sinensis
CSS0046508 Camellia sinensis var. sinensis
DCAR_031208 Daucus carota
Dinv07034 Davidia involucrata
Duzib248G1635 Durio zibethinus
ECA234G0820 Erigeron canadensis
EL10Ac6g13564 Beta vulgaris
Eucgr.H04584 Eucalyptus grandis
Eucgr.H04586 Eucalyptus grandis
Eucgr.H04588 Eucalyptus grandis
Eucgr.H04593 Eucalyptus grandis
Eucgr.H04595 Eucalyptus grandis
Eucgr.H04597 Eucalyptus grandis
Eucgr.K02175 Eucalyptus grandis
Eucgr.K02180 Eucalyptus grandis
FAN12G2279 Fragaria x ananassa
FvH4_4g23150 Fragaria vesca
Glyma.03G119400 Glycine max
Glyma.19G123700 Glycine max
Gohir.A13G153400 Gossypium hirsutum
Gohir.D13G158000 Gossypium hirsutum
Gorai.013G178700 Gossypium raimondii
GSVIVG01000939001 Vitis vinifera
HanXRQChr05g0148171 Helianthus annuus
Haze_12466 Corylus avellana
Hma1.2p1_1436F.1_g283170 Hydrangea macrophylla
Hma1.2p1_1436F.1_g283180 Hydrangea macrophylla
Hma1.2p1_1436F.1_g283200 Hydrangea macrophylla
HPP92_000335 Vanilla planifolia
Hund06115 Selenicereus undatus
Lalb_Chr21g0307751 Lupinus albus
Lj6C833T8 Lonicera japonica
LjContig00470g0027621 Lotus japonicus
Lsat_1_v5_gn_4_1980 Lactuca sativa
Manes.12G006600 Manihot esculenta
Mapoly0065s0040 Marchantia polymorpha
MBI11_g29215_MAGBIO Magnolia biondii
MBI11_g29216_MAGBIO Magnolia biondii
MD13G1124500 Malus domestica
MD16G1125500 Malus domestica
MD16G1125600 Malus domestica
Medtr3g085700 Medicago truncatula
MELO3C017752.2 Cucumis melo
Migut.E00002 Erythranthe guttata
MSTRG.2466 Avicennia marina
Nitab4.5_0000340g0140 Nicotiana tabacum
Nn3g17941 Nelumbo nucifera
Nn5g27151 Nelumbo nucifera
Os01g0925200 Oryza sativa ssp. japonica
Peaxi162Scf00128g01626 Petunia axillaris
PGR119G1868 Punica granatum
Phvul.007G000700 Phaseolus vulgaris
Potri.001G061000 Populus trichocarpa
Potri.003G166700 Populus trichocarpa
Pp3c16_3210 Physcomitrium patens
Prupe.1G220600 Prunus persica
Psat6g243840 Pisum sativum
Psat7g156320 Pisum sativum
PSO478G2361 Papaver somniferum
QL03p050823 Quercus lobata
QL03p050834 Quercus lobata
QL12p038785 Quercus lobata
RcHm_v2.0_Chr4g0429491 Rosa chinensis
Rhsim12G0021800 Rhododendron simsii
Sabra01G0043900 Salix brachista
Sabra03G0122000 Salix brachista
Sc12g0006910 Simmondsia chinensis
Sed0008053 Sechium edule
Sed0021300 Sechium edule
SEGI_23101 Sequoiadendron giganteum
SGA_v2.0_scaffold391G50614 Striga asiatica
SHI07401 Sapria himalayana
SMO171G0023 Selaginella moellendorffii
Solyc05g024235.1 Solanum lycopersicum
Sopen05g019110 Solanum pennellii
Sp2g08090 Schrenkiella parvula
TAR374G0112 Trochodendron aralioides
Thecc.02G198300 Theobroma cacao
Thhalv10003257m.g Eutrema salsugineum
TPR.G417 Trifolium pratense
TWI18G0387 Tripterygium wilfordii
unitig_22.g5514 Utricularia gibba
unitig_22.g5515 Utricularia gibba
vmacro01035 Vaccinium macrocarpon
VMungo0720G0878 Vigna mungo
Zm00001eb187100 Zea mays
Zm00001eb363960 Zea mays

User provided reference genes

Program Settings