Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38280 Brassica napus
A09p04870 Brassica napus
Aa31LG11G8340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis
Ah.13g071490 Amaranthus hybridus
AL8G23330 Arabidopsis lyrata
Aqoxy5G02923 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea
AT5G49540 Arabidopsis thaliana
ATR0598G271 Amborella trichopoda
Atru.chr4.3063 Acer truncatum
AUR62016242 Chenopodium quinoa
AUR62032779 Chenopodium quinoa
BcaB04g19617 Brassica carinata
BcaC04g23733 Brassica carinata
BolC7t44528H Brassica oleracea
BolC9t53453H Brassica oleracea
BraA06t26743Z Brassica rapa
BraA09t36124Z Brassica rapa
C09p05260 Brassica napus
CAN.G1860.1 Capsicum annuum
CAN.G484.71 Capsicum annuum
CAN.G938.2 Capsicum annuum
CANSAT78G0499 Cannabis sativa
CARHR287970 Cardamine hirsuta
Carub.0008s0942 Capsella rubella
Ca_00962_v3 Cicer arietinum L.
CBR_g22909 Chara braunii
Cc06_g13180 Coffea canephora
CDE06G0356 Ceratophyllum demersum
CDE07G1301 Ceratophyllum demersum
Ciclev10006078m.g Citrus clementina
CiPaw.01G134900 Carya illinoinensis
CiPaw.02G072600 Carya illinoinensis
ClCG03G017390 Citrullus lanatus
COL.COLO4_34571 Corchorus olitorius
Cpa.g.sc9.16 Carica papaya
Cre14.g614250 Chlamydomonas reinhardtii
CsaV3_1G038810 Cucumis sativus L.
CSS0010593 Camellia sinensis var. sinensis
CSS0033510 Camellia sinensis var. sinensis
DCAR_026978 Daucus carota
Dinv15139 Davidia involucrata
Dinv44258 Davidia involucrata
Duzib212G0918 Durio zibethinus
ECA246G4816 Erigeron canadensis
EL10Ac3g05546 Beta vulgaris
Eucgr.F02752 Eucalyptus grandis
FAN07G2916 Fragaria x ananassa
FAN12G4019 Fragaria x ananassa
FvH4_4g20620 Fragaria vesca
Glyma.09G033400 Glycine max
Glyma.15G138200 Glycine max
Glyma.17G036700 Glycine max
Gohir.A02G055900 Gossypium hirsutum
Gohir.A10G174500 Gossypium hirsutum
Gohir.D02G061100 Gossypium hirsutum
Gohir.D10G181000 Gossypium hirsutum
Gorai.005G068700 Gossypium raimondii
Gorai.011G202500 Gossypium raimondii
HanXRQChr01g0022341 Helianthus annuus
HanXRQChr10g0310551 Helianthus annuus
Haze_01347 Corylus avellana
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla
HPP92_015326 Vanilla planifolia
Hund11992 Selenicereus undatus
Lalb_Chr18g0058561 Lupinus albus
Lalb_Chr20g0120691 Lupinus albus
Lj6E694T0 Lonicera japonica
Lj6g0013029 Lotus japonicus
Lsat_1_v5_gn_3_139661 Lactuca sativa
Lsat_1_v5_gn_6_116081 Lactuca sativa
Manes.11G060400 Manihot esculenta
Manes.11G109500 Manihot esculenta
Mapoly0008s0274 Marchantia polymorpha
MBI10_g06741_MAGBIO Magnolia biondii
MCO06G009 Micromonas commoda
MD01G1183100 Malus domestica
MD13G1149300 Malus domestica
MD16G1149600 Malus domestica
Medtr2g033590 Medicago truncatula
Medtr2g097970 Medicago truncatula
MELO3C015305.2 Cucumis melo
Migut.G00039 Erythranthe guttata
Migut.O00585 Erythranthe guttata
MSTRG.3846 Avicennia marina
Nitab4.5_0002561g0080 Nicotiana tabacum
Nitab4.5_0008521g0010 Nicotiana tabacum
Nitab4.5_0012592g0010 Nicotiana tabacum
Nn1g07816 Nelumbo nucifera
Nn3g21792 Nelumbo nucifera
Nn8g38759 Nelumbo nucifera
Nn8g41304 Nelumbo nucifera
Oeu048287.1 Olea europaea
Oeu052158.1 Olea europaea
Peaxi162Scf00228g00733 Petunia axillaris
PGR004G2070 Punica granatum
PGSC0003DMG401029058 Solanum tuberosum
Phvul.006G120000 Phaseolus vulgaris
Potri.008G102200 Populus trichocarpa
Potri.010G148600 Populus trichocarpa
PRCOL_00001634 Prasinoderma coloniale
Prupe.1G113300 Prunus persica
Psat0s5068g0040 Pisum sativum
PSO063G2615 Papaver somniferum
PSO782G0665 Papaver somniferum
QL02p001630 Quercus lobata
QL06p012974 Quercus lobata
RcHm_v2.0_Chr4g0425981 Rosa chinensis
Sabra10G0114700 Salix brachista
SalBow8G4800 Salvia bowleyana
Sc13g0007210 Simmondsia chinensis
Sed0008051 Sechium edule
Sed0013449 Sechium edule
SEGI_13216 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37338 Striga asiatica
SMO117G0178 Selaginella moellendorffii
Solyc01g058280.4 Solanum lycopersicum
Sopen01g023770 Solanum pennellii
Sp2g19850 Schrenkiella parvula
TAR371G1140 Trochodendron aralioides
THA.LOC104818873 Tarenaya hassleriana
THA.LOC104827102 Tarenaya hassleriana
Thecc.04G305600 Theobroma cacao
Thhalv10005160m.g Eutrema salsugineum
TPR.G30159 Trifolium pratense
TPR.G33875 Trifolium pratense
TWI09G0868 Tripterygium wilfordii
TWI53G0383 Tripterygium wilfordii
TWI73G0491 Tripterygium wilfordii
vmacro09713 Vaccinium macrocarpon
VMungo0540G1255 Vigna mungo
Zm00001eb295100 Zea mays
Zm00001eb343110 Zea mays

User provided reference genes

Program Settings