Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31sc866G40 Aethionema arabicum
Actinidia37584 Actinidia chinensis
Ah.08g214020 Amaranthus hybridus
AL8G22020 Arabidopsis lyrata
Aqoxy2G03764 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL96XS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRPB72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5YBAW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1HUIQ Arachis hypogaea
AT5G48840 Arabidopsis thaliana
ATR0736G181 Amborella trichopoda
Atru.chr5.1498 Acer truncatum
Atru.chr5.2014 Acer truncatum
Atru.chr5.2015 Acer truncatum
AUR62008875 Chenopodium quinoa
AUR62031834 Chenopodium quinoa
BcaC06g30729 Brassica carinata
BcaC06g30753 Brassica carinata
BolC7t44465H Brassica oleracea
BraA06t26801Z Brassica rapa
C07p39460 Brassica napus
CAN.G122.7 Capsicum annuum
CAN.G1273.33 Capsicum annuum
CANSAT01G1736 Cannabis sativa
CANSAT54G2179 Cannabis sativa
CANSAT56G1556 Cannabis sativa
CARHR182880 Cardamine hirsuta
Carub.0008s0857 Capsella rubella
Ca_07533_v3 Cicer arietinum L.
CBR_g41676 Chara braunii
Cc01_g17220 Coffea canephora
CDE01G0096 Ceratophyllum demersum
Cfa002558 Carpinus fangiana
Cfa025604 Carpinus fangiana
Ciclev10021316m.g Citrus clementina
CiPaw.04G106400 Carya illinoinensis
ClCG07G001860 Citrullus lanatus
COL.COLO4_06654 Corchorus olitorius
Cpa.g.sc8.172 Carica papaya
Cre02.g090150 Chlamydomonas reinhardtii
CsaV3_1G001100 Cucumis sativus L.
CsaV3_3G028840 Cucumis sativus L.
CsaV3_6G036910 Cucumis sativus L.
CSS0013378 Camellia sinensis var. sinensis
CSS0038259 Camellia sinensis var. sinensis
DCAR_018553 Daucus carota
Dinv04663 Davidia involucrata
Duzib211G0062 Durio zibethinus
ECA236G4489 Erigeron canadensis
EL10Ac7g17787 Beta vulgaris
Eucgr.H00804 Eucalyptus grandis
FAN15G3610 Fragaria x ananassa
FAN24G1307 Fragaria x ananassa
FvH4_2g19300 Fragaria vesca
Glyma.08G355700 Glycine max
Glyma.18G172500 Glycine max
Gohir.A07G156000 Gossypium hirsutum
Gohir.D07G162300 Gossypium hirsutum
Gorai.001G185900 Gossypium raimondii
GSVIVG01028578001 Vitis vinifera
HanXRQChr04g0110691 Helianthus annuus
HanXRQChr16g0514371 Helianthus annuus
Haze_24781 Corylus avellana
Haze_26957 Corylus avellana
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla
HPP92_021568 Vanilla planifolia
Hund18358 Selenicereus undatus
Lalb_Chr19g0125551 Lupinus albus
Lj1g0018515 Lotus japonicus
Lj2A1133T34 Lonicera japonica
Lsat_1_v5_gn_8_90101 Lactuca sativa
Manes.12G042650 Manihot esculenta
Mapoly0006s0023 Marchantia polymorpha
MCO10G244 Micromonas commoda
MD05G1177900 Malus domestica
MD05G1178000 Malus domestica
MD10G1166100 Malus domestica
Medtr7g058920 Medicago truncatula
MELO3C014350.2 Cucumis melo
MELO3C026704.2 Cucumis melo
Migut.D00523 Erythranthe guttata
Migut.I00044 Erythranthe guttata
MSTRG.21429 Avicennia marina
Nitab4.5_0000866g0040 Nicotiana tabacum
Nitab4.5_0000866g0080 Nicotiana tabacum
Nitab4.5_0003790g0040 Nicotiana tabacum
Nn1g07785 Nelumbo nucifera
Nn1g07786 Nelumbo nucifera
Nn3g19926 Nelumbo nucifera
Oeu015466.1 Olea europaea
Os03g0851800 Oryza sativa ssp. japonica
Peaxi162Scf00107g01116 Petunia axillaris
PGR083G1301 Punica granatum
PGSC0003DMG400002375 Solanum tuberosum
Phvul.007G209400 Phaseolus vulgaris
Potri.002G240800 Populus trichocarpa
Pp3c24_12730 Physcomitrium patens
Prupe.8G204600 Prunus persica
Psat3g144240 Pisum sativum
PSO017G3643 Papaver somniferum
PSO478G2025 Papaver somniferum
QL03p049466 Quercus lobata
RcHm_v2.0_Chr6g0285101 Rosa chinensis
Rhsim13G0044300 Rhododendron simsii
Sabra02G0183400 Salix brachista
Sc17g0002580 Simmondsia chinensis
Sed0016487 Sechium edule
SEGI_11949 Sequoiadendron giganteum
SEGI_26814 Sequoiadendron giganteum
SEGI_32261 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04652 Striga asiatica
SHI28627 Sapria himalayana
SMO144G0038 Selaginella moellendorffii
SMO351G0371 Selaginella moellendorffii
Solyc09g061680.3 Solanum lycopersicum
Sopen09g024670 Solanum pennellii
Sp2g19240 Schrenkiella parvula
TAR365G0091 Trochodendron aralioides
TAR365G1033 Trochodendron aralioides
TAR636G1319 Trochodendron aralioides
THA.LOC104802678 Tarenaya hassleriana
Thecc.01G227800 Theobroma cacao
Thhalv10004618m.g Eutrema salsugineum
TPR.G15281 Trifolium pratense
TWI75G1873 Tripterygium wilfordii
unitig_92.g28105 Utricularia gibba
unitig_92.g28106 Utricularia gibba
vmacro02749 Vaccinium macrocarpon
vmacro15781 Vaccinium macrocarpon
vmacro15783 Vaccinium macrocarpon
vmacro23327 Vaccinium macrocarpon
VMungo0516G0001 Vigna mungo
Zm00001eb064670 Zea mays

User provided reference genes

Program Settings