Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09080 Brassica napus
A10p13790 Brassica napus
Aa31LG3G12360 Aethionema arabicum
Aa31sc1870G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1800 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5376 Anthoceros agrestis
Actinidia01223 Actinidia chinensis
Actinidia30322 Actinidia chinensis
Ah.10g034200 Amaranthus hybridus
Ah.10g034210 Amaranthus hybridus
AL8G32180 Arabidopsis lyrata
Aqoxy7G04023 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3GEU56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJ6692 Arachis hypogaea
AT5G56450 Arabidopsis thaliana
ATR0026G015 Amborella trichopoda
Atru.chr7.1095 Acer truncatum
AUR62009128 Chenopodium quinoa
AUR62039127 Chenopodium quinoa
AUR62044309 Chenopodium quinoa
BcaC04g20089 Brassica carinata
BolC2t07638H Brassica oleracea
BolC9t57649H Brassica oleracea
BraA02t05976Z Brassica rapa
BraA10t43473Z Brassica rapa
C09p48020 Brassica napus
CAN.G9.25 Capsicum annuum
CANSAT25G3606 Cannabis sativa
CARHR270070 Cardamine hirsuta
Carub.0008s1695 Capsella rubella
Ca_15860_v3 Cicer arietinum L.
CBR_g12060 Chara braunii
CBR_g46364 Chara braunii
CBR_g47108 Chara braunii
CBR_g70709 Chara braunii
CBR_g70727 Chara braunii
CBR_g8681 Chara braunii
Cc08_g10780 Coffea canephora
Cc08_g10790 Coffea canephora
CDE06G0925 Ceratophyllum demersum
Cfa021440 Carpinus fangiana
Ciclev10008927m.g Citrus clementina
CiPaw.16G027900 Carya illinoinensis
ClCG08G017060 Citrullus lanatus
COL.COLO4_21075 Corchorus olitorius
Cpa.g.sc7.188 Carica papaya
CsaV3_2G025530 Cucumis sativus L.
CSS0020736 Camellia sinensis var. sinensis
CSS0026843 Camellia sinensis var. sinensis
DCAR_003135 Daucus carota
Dinv22888 Davidia involucrata
Dinv27997 Davidia involucrata
Duzib150G0160 Durio zibethinus
Duzib187G0702 Durio zibethinus
ECA246G3413 Erigeron canadensis
EL10Ac2g03836 Beta vulgaris
Eucgr.C00662 Eucalyptus grandis
FAN15G3303 Fragaria x ananassa
FAN24G0695 Fragaria x ananassa
FAN27G3098 Fragaria x ananassa
FvH4_2g31710 Fragaria vesca
Glyma.04G051800 Glycine max
Glyma.06G052500 Glycine max
Gohir.A05G041400 Gossypium hirsutum
Gohir.A05G041450 Gossypium hirsutum
Gohir.A06G086500 Gossypium hirsutum
Gohir.D05G043100 Gossypium hirsutum
Gohir.D06G086000 Gossypium hirsutum
Gorai.009G044200 Gossypium raimondii
Gorai.010G099200 Gossypium raimondii
GSVIVG01035388001 Vitis vinifera
HanXRQChr17g0538421 Helianthus annuus
Haze_18167 Corylus avellana
Haze_26892 Corylus avellana
Hma1.2p1_0544F.1_g175720 Hydrangea macrophylla
HPP92_009132 Vanilla planifolia
Hund03329 Selenicereus undatus
Lalb_Chr23g0267801 Lupinus albus
Lj1g0011054 Lotus japonicus
Lj7A266G20 Lonicera japonica
Lsat_1_v5_gn_3_25061 Lactuca sativa
Manes.03G049300 Manihot esculenta
Mapoly0016s0183 Marchantia polymorpha
MBI04_g34123_MAGBIO Magnolia biondii
MD08G1063700 Malus domestica
MD15G1057900 Malus domestica
Medtr3g104500 Medicago truncatula
MELO3C010750.2 Cucumis melo
Migut.E01779 Erythranthe guttata
MSTRG.11654 Avicennia marina
MSTRG.1686 Avicennia marina
Nitab4.5_0005436g0030 Nicotiana tabacum
Nitab4.5_0007228g0010 Nicotiana tabacum
Nn3g18552 Nelumbo nucifera
Nn8g38820 Nelumbo nucifera
Oeu036329.1 Olea europaea
Os05g0539600 Oryza sativa ssp. japonica
Peaxi162Scf00327g00911 Petunia axillaris
PGR031G1296 Punica granatum
Phvul.009G078000 Phaseolus vulgaris
Potri.006G227100 Populus trichocarpa
Potri.018G062350 Populus trichocarpa
Pp3c16_2360 Physcomitrium patens
Pp3s383_30 Physcomitrium patens
Prupe.1G410600 Prunus persica
Psat5g036440 Pisum sativum
PSO210G0697 Papaver somniferum
PSO210G5829 Papaver somniferum
QL02p000982 Quercus lobata
RcHm_v2.0_Chr6g0311111 Rosa chinensis
Rhsim11G0043300 Rhododendron simsii
Sabra06G0175700 Salix brachista
SalBow1G4844 Salvia bowleyana
Sc24g0002020 Simmondsia chinensis
Sed0008345 Sechium edule
Sed0008669 Sechium edule
SEGI_03567 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38022 Striga asiatica
SHI18728 Sapria himalayana
SMO367G0283 Selaginella moellendorffii
Solyc08g063010.3 Solanum lycopersicum
Solyc08g063030.2 Solanum lycopersicum
Sopen08g018590 Solanum pennellii
Sp6g18260 Schrenkiella parvula
TAR383G0093 Trochodendron aralioides
TAR626G1274 Trochodendron aralioides
THA.LOC104804439 Tarenaya hassleriana
Thecc.09G055900 Theobroma cacao
Thhalv10014052m.g Eutrema salsugineum
TPR.G20653 Trifolium pratense
TPR.G27577 Trifolium pratense
TWI32G0416 Tripterygium wilfordii
unitig_46.g17911 Utricularia gibba
vmacro00132 Vaccinium macrocarpon
vmacro00133 Vaccinium macrocarpon
VMungo1309G2134 Vigna mungo
Zm00001eb294240 Zea mays

User provided reference genes

Program Settings