Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p24820 Brassica napus
Aa31LG10G14030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4224 Anthoceros agrestis
AL5G41820 Arabidopsis lyrata
Aqoxy5G00015 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea
AT3G59780 Arabidopsis thaliana
ATR0743G254 Amborella trichopoda
Atru.chr4.1471 Acer truncatum
Atru.chr4.1498 Acer truncatum
Atru.chr4.1499 Acer truncatum
Atru.chr4.1500 Acer truncatum
AUR62002413 Chenopodium quinoa
AUR62023776 Chenopodium quinoa
BcaB02g07447 Brassica carinata
BcaC07g40447 Brassica carinata
BcaC07g40503 Brassica carinata
BcaC08g45005 Brassica carinata
BolC6t37802H Brassica oleracea
BolC8t51075H Brassica oleracea
BraA07t30126Z Brassica rapa
C06p26400 Brassica napus
C08p34730 Brassica napus
CAN.G207.4 Capsicum annuum
CANSAT56G0139 Cannabis sativa
CARHR151070 Cardamine hirsuta
CARHR170120 Cardamine hirsuta
CARHR183720 Cardamine hirsuta
Carub.0005s2649 Capsella rubella
Carub.0005s2650 Capsella rubella
Ca_16400_v3 Cicer arietinum L.
Ca_19887_v3 Cicer arietinum L.
CBR_g30747 Chara braunii
Cc03_g14460 Coffea canephora
Cfa015678 Carpinus fangiana
CiPaw.01G169400 Carya illinoinensis
ClCG08G017200 Citrullus lanatus
Cpa.g.sc9.387 Carica papaya
Cre05.g247450 Chlamydomonas reinhardtii
CsaV3_2G025410 Cucumis sativus L.
CSS0001444 Camellia sinensis var. sinensis
CSS0016204 Camellia sinensis var. sinensis
DCAR_029617 Daucus carota
Dinv18319 Davidia involucrata
Duzib151G1049 Durio zibethinus
Duzib212G0953 Durio zibethinus
ECA233G1690 Erigeron canadensis
EL10Ac3g06107 Beta vulgaris
Eucgr.L00011 Eucalyptus grandis
FAN23G1844 Fragaria x ananassa
FAN26G0446 Fragaria x ananassa
FAN28G2262 Fragaria x ananassa
FvH4_1g00540 Fragaria vesca
Glyma.11G255300 Glycine max
Glyma.18G001800 Glycine max
Gohir.A09G213616 Gossypium hirsutum
Gohir.A10G145200 Gossypium hirsutum
Gohir.D09G212700 Gossypium hirsutum
Gohir.D10G121800 Gossypium hirsutum
Gorai.006G232500 Gossypium raimondii
Gorai.011G133900 Gossypium raimondii
GSVIVG01038182001 Vitis vinifera
HanXRQChr02g0059091 Helianthus annuus
Haze_00856 Corylus avellana
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla
HPP92_007033 Vanilla planifolia
HPP92_007065 Vanilla planifolia
Hund22526 Selenicereus undatus
Lalb_Chr23g0278351 Lupinus albus
Lj3C160T4 Lonicera japonica
Lj6g0024009 Lotus japonicus
Lsat_1_v5_gn_6_67720 Lactuca sativa
Manes.05G131200 Manihot esculenta
Mapoly0056s0110 Marchantia polymorpha
MBI07_g33481_MAGBIO Magnolia biondii
MCO14G011 Micromonas commoda
MD02G1004500 Malus domestica
MD15G1148200 Malus domestica
Medtr3g084030 Medicago truncatula
MELO3C010738.2 Cucumis melo
Migut.D00990 Erythranthe guttata
Nitab4.5_0000064g0020 Nicotiana tabacum
Nitab4.5_0002913g0010 Nicotiana tabacum
Nitab4.5_0009728g0050 Nicotiana tabacum
Nn7g37529 Nelumbo nucifera
Oeu017118.1 Olea europaea
Oeu023600.1 Olea europaea
Os01g0896500 Oryza sativa ssp. japonica
Os05g0441750 Oryza sativa ssp. japonica
Peaxi162Scf00883g00320 Petunia axillaris
PGR042G2382 Punica granatum
PGR044G0369 Punica granatum
Phvul.001G267200 Phaseolus vulgaris
Potri.013G128300 Populus trichocarpa
Potri.014G182410 Populus trichocarpa
Potri.019G095833 Populus trichocarpa
Potri.019G097901 Populus trichocarpa
Potri.019G098001 Populus trichocarpa
Potri.019G098950 Populus trichocarpa
Pp3c5_10150 Physcomitrium patens
Prupe.7G266600 Prunus persica
Psat5g100720 Pisum sativum
PSO210G4833 Papaver somniferum
PSO832G1829 Papaver somniferum
QL10p057166 Quercus lobata
QL10p057536 Quercus lobata
RcHm_v2.0_Chr2g0085171 Rosa chinensis
RcHm_v2.0_Chr6g0284261 Rosa chinensis
Rhsim09G0007900 Rhododendron simsii
Sabra13G0107200 Salix brachista
SalBow1G7464 Salvia bowleyana
SalBow7G2884 Salvia bowleyana
Sc19g0006380 Simmondsia chinensis
Sed0015570 Sechium edule
Sed0022147 Sechium edule
SEGI_21812 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22529 Striga asiatica
Solyc03g059170.2 Solanum lycopersicum
Solyc03g059180.4 Solanum lycopersicum
Sopen03g013370 Solanum pennellii
Sp5g03370 Schrenkiella parvula
TAR362G0201 Trochodendron aralioides
THA.LOC104802334 Tarenaya hassleriana
Thecc.04G163300 Theobroma cacao
Thhalv10005829m.g Eutrema salsugineum
TPR.G17194 Trifolium pratense
TPR.G35147 Trifolium pratense
TWI15G0946 Tripterygium wilfordii
unitig_32.g10984 Utricularia gibba
unitig_748.g8088 Utricularia gibba
unitig_748.g8089 Utricularia gibba
vmacro00684 Vaccinium macrocarpon
VMungo1127G1500 Vigna mungo
VMungo1383G0014 Vigna mungo
Zm00001eb144770 Zea mays

User provided reference genes

Program Settings