Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00950 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis
Actinidia28121 Actinidia chinensis
Ah.05g179600 Amaranthus hybridus
AL5G44280 Arabidopsis lyrata
Aqoxy5G04231 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea
AT3G61730 Arabidopsis thaliana
AT3G62500 Arabidopsis thaliana
AT5G36000 Arabidopsis thaliana
ATR0602G065 Amborella trichopoda
Atru.chr5.661 Acer truncatum
AUR62004487 Chenopodium quinoa
AUR62023466 Chenopodium quinoa
BcaB02g08143 Brassica carinata
BcaB02g08144 Brassica carinata
BcaC02g10247 Brassica carinata
BcaC02g10248 Brassica carinata
BolC4t24651H Brassica oleracea
BolC6t37952H Brassica oleracea
BraA04t15812Z Brassica rapa
C04p31120 Brassica napus
C06p27850 Brassica napus
C06p27910 Brassica napus
CAN.G986.8 Capsicum annuum
CANSAT56G2355 Cannabis sativa
CARHR055570 Cardamine hirsuta
CARHR172060 Cardamine hirsuta
Carub.0005s2847 Capsella rubella
Ca_23539_v3 Cicer arietinum L.
CBR_g49078 Chara braunii
CBR_g71803 Chara braunii
Cc02_g39290 Coffea canephora
CDE02G2715 Ceratophyllum demersum
CDE02G3030 Ceratophyllum demersum
Ciclev10023676m.g Citrus clementina
CiPaw.02G040500 Carya illinoinensis
ClCG06G001200 Citrullus lanatus
Cpa.g.sc96.9 Carica papaya
CsaV3_6G007130 Cucumis sativus L.
CSS0003243 Camellia sinensis var. sinensis
CSS0016052 Camellia sinensis var. sinensis
DCAR_006973 Daucus carota
Dinv35112 Davidia involucrata
Duzib133G1228 Durio zibethinus
Duzib138G1692 Durio zibethinus
EL10Ac1g00275 Beta vulgaris
Eucgr.D02371 Eucalyptus grandis
FAN01G2486 Fragaria x ananassa
FAN03G1068 Fragaria x ananassa
FAN06G0495 Fragaria x ananassa
FAN06G0513 Fragaria x ananassa
FAN10G1076 Fragaria x ananassa
FAN10G3131 Fragaria x ananassa
FvH4_7g16360 Fragaria vesca
Glyma.07G056100 Glycine max
Glyma.16G025000 Glycine max
Gohir.A08G034400 Gossypium hirsutum
Gohir.D08G044900 Gossypium hirsutum
Gorai.004G043900 Gossypium raimondii
GSVIVG01027095001 Vitis vinifera
GSVIVG01027098001 Vitis vinifera
GSVIVG01027101001 Vitis vinifera
GSVIVG01027108001 Vitis vinifera
GSVIVG01027114001 Vitis vinifera
HanXRQChr04g0120221 Helianthus annuus
HanXRQChr09g0243571 Helianthus annuus
Haze_15659 Corylus avellana
HPP92_002828 Vanilla planifolia
Lalb_Chr10g0100491 Lupinus albus
Lalb_Chr10g0100501 Lupinus albus
Lj1g0015259 Lotus japonicus
Lj3g0003332 Lotus japonicus
Lj7A501T47 Lonicera japonica
Lsat_1_v5_gn_7_1240 Lactuca sativa
Manes.01G246600 Manihot esculenta
Mapoly0251s0003 Marchantia polymorpha
MBI06_g08454_MAGBIO Magnolia biondii
MD01G1080100 Malus domestica
MD07G1149100 Malus domestica
Medtr8g027735 Medicago truncatula
MELO3C022415.2 Cucumis melo
Migut.B01870 Erythranthe guttata
Migut.N01547 Erythranthe guttata
MSTRG.17339 Avicennia marina
Nitab4.5_0000838g0230 Nicotiana tabacum
Nitab4.5_0004999g0020 Nicotiana tabacum
Nn2g14772 Nelumbo nucifera
Oeu004946.1 Olea europaea
Oeu015362.1 Olea europaea
Os01g0219200 Oryza sativa ssp. japonica
Peaxi162Scf00786g00323 Petunia axillaris
PGR031G1800 Punica granatum
PGSC0003DMG400000222 Solanum tuberosum
Phvul.010G113800 Phaseolus vulgaris
Potri.014G098300 Populus trichocarpa
Pp3c6_8570 Physcomitrium patens
Prupe.2G187500 Prunus persica
Psat4g160760 Pisum sativum
PSO063G6641 Papaver somniferum
PSO478G0645 Papaver somniferum
PSO782G3674 Papaver somniferum
QL04p061137 Quercus lobata
RcHm_v2.0_Chr1g0359371 Rosa chinensis
Rhsim01G0172200 Rhododendron simsii
Rhsim02G0230200 Rhododendron simsii
Sabra02G0141900 Salix brachista
SalBow3G4091 Salvia bowleyana
Sc26g0000660 Simmondsia chinensis
Sc26g0000670 Simmondsia chinensis
Sed0003230 Sechium edule
SEGI_01413 Sequoiadendron giganteum
SEGI_08329 Sequoiadendron giganteum
SGA_v2.0_scaffold5G03015 Striga asiatica
SHI13291 Sapria himalayana
SHI13292 Sapria himalayana
SHI13293 Sapria himalayana
SMO164G0232 Selaginella moellendorffii
SMO200G0118 Selaginella moellendorffii
Solyc01g095870.3 Solanum lycopersicum
Sopen01g039610 Solanum pennellii
Sp5g01640 Schrenkiella parvula
TAR375G0589 Trochodendron aralioides
THA.LOC104802069 Tarenaya hassleriana
THA.LOC104817360 Tarenaya hassleriana
Thecc.01G343200 Theobroma cacao
Thhalv10006430m.g Eutrema salsugineum
TPR.G15352 Trifolium pratense
TPR.G3009 Trifolium pratense
TWI14G0815 Tripterygium wilfordii
TWI59G0780 Tripterygium wilfordii
unitig_747.g21341 Utricularia gibba
VMungo0331G1881 Vigna mungo
Zm00001eb119810 Zea mays
Zm00001eb338700 Zea mays

User provided reference genes

Program Settings