Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p30320 Brassica napus
A07p38300 Brassica napus
Aa31LG4G8380 Aethionema arabicum
Actinidia23027 Actinidia chinensis
Ah.05g178660 Amaranthus hybridus
AL2G31850 Arabidopsis lyrata
Aqoxy3G02325 Aquilegia oxysepala
Aqoxy3G02326 Aquilegia oxysepala
Aqoxy6G00089 Aquilegia oxysepala
Aqoxy7G02553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Z4QCU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EKFW0H Arachis hypogaea
AT1G72180 Arabidopsis thaliana
ATR1136G070 Amborella trichopoda
Atru.chr13.2328 Acer truncatum
AUR62004589 Chenopodium quinoa
AUR62023560 Chenopodium quinoa
BcaB03g14962 Brassica carinata
BcaC08g45722 Brassica carinata
BcaC08g46665 Brassica carinata
BolC6t38611H Brassica oleracea
BolC6t39682H Brassica oleracea
BraA07t30669Z Brassica rapa
BraA07t31394Z Brassica rapa
C06p35070 Brassica napus
C06p46360 Brassica napus
CAN.G1647.7 Capsicum annuum
CANSAT25G0280 Cannabis sativa
CARHR065040 Cardamine hirsuta
Carub.0002s1899 Capsella rubella
Ca_19671_v3 Cicer arietinum L.
Cc10_g11310 Coffea canephora
CDE07G0678 Ceratophyllum demersum
Cfa012927 Carpinus fangiana
Ciclev10018710m.g Citrus clementina
CiPaw.07G234800 Carya illinoinensis
CiPaw.08G003400 Carya illinoinensis
ClCG08G008670 Citrullus lanatus
COL.COLO4_24634 Corchorus olitorius
CsaV3_6G004690 Cucumis sativus L.
CSS0028095 Camellia sinensis var. sinensis
CSS0040820 Camellia sinensis var. sinensis
DCAR_014393 Daucus carota
DCAR_016678 Daucus carota
Dinv19852 Davidia involucrata
Dinv41781 Davidia involucrata
Duzib177G0302 Durio zibethinus
Duzib211G0226 Durio zibethinus
ECA246G4594 Erigeron canadensis
EL10Ac1g00147 Beta vulgaris
EL10Ac5g12266 Beta vulgaris
Eucgr.F02986 Eucalyptus grandis
FAN04G0349 Fragaria x ananassa
FAN13G2135 Fragaria x ananassa
FAN18G2054 Fragaria x ananassa
FvH4_5g31430 Fragaria vesca
Glyma.12G002500 Glycine max
Gohir.A05G251900 Gossypium hirsutum
Gohir.A05G272300 Gossypium hirsutum
Gohir.D05G253700 Gossypium hirsutum
Gohir.D05G274500 Gossypium hirsutum
Gorai.009G265300 Gossypium raimondii
Gorai.009G287800 Gossypium raimondii
GSVIVG01026000001 Vitis vinifera
HanXRQChr17g0549631 Helianthus annuus
Haze_21339 Corylus avellana
Haze_21341 Corylus avellana
HPP92_027069 Vanilla planifolia
Hund16769 Selenicereus undatus
Hund27124 Selenicereus undatus
Hund27129 Selenicereus undatus
Lalb_Chr19g0140451 Lupinus albus
Lj3g0025903 Lotus japonicus
Lj7A283T26 Lonicera japonica
Lsat_1_v5_gn_3_800 Lactuca sativa
Manes.02G199300 Manihot esculenta
Manes.18G107100 Manihot esculenta
MBI03_g18684_MAGBIO Magnolia biondii
MBI06_g37371_MAGBIO Magnolia biondii
MD08G1217600 Malus domestica
MD15G1404900 Malus domestica
Medtr4g035200 Medicago truncatula
MELO3C019939.2 Cucumis melo
Migut.C01278 Erythranthe guttata
MSTRG.1534 Avicennia marina
MSTRG.25454 Avicennia marina
Nitab4.5_0000303g0230 Nicotiana tabacum
Nitab4.5_0000365g0170 Nicotiana tabacum
Nitab4.5_0000365g0180 Nicotiana tabacum
Nitab4.5_0001082g0110 Nicotiana tabacum
Nitab4.5_0003818g0070 Nicotiana tabacum
Nn5g27436 Nelumbo nucifera
Nn5g31447 Nelumbo nucifera
Os01g0878300 Oryza sativa ssp. japonica
Os11g0232100 Oryza sativa ssp. japonica
Peaxi162Scf00268g00911 Petunia axillaris
Peaxi162Scf00391g00319 Petunia axillaris
PGR042G0412 Punica granatum
PGSC0003DMG400023282 Solanum tuberosum
PGSC0003DMG400026072 Solanum tuberosum
Phvul.011G003200 Phaseolus vulgaris
Potri.019G078400 Populus trichocarpa
Prupe.1G556200 Prunus persica
Psat7g145280 Pisum sativum
Psat7g145320 Pisum sativum
PSO170G4053 Papaver somniferum
PSO782G3305 Papaver somniferum
QL02p023785 Quercus lobata
RcHm_v2.0_Chr7g0226871 Rosa chinensis
Rhsim12G0005500 Rhododendron simsii
Sabra19G0089400 Salix brachista
SalBow7G2008 Salvia bowleyana
Sc23g0001570 Simmondsia chinensis
Sed0002357 Sechium edule
SEGI_31621 Sequoiadendron giganteum
SEGI_32919 Sequoiadendron giganteum
SEGI_39679 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32540 Striga asiatica
SGA_v2.0_scaffold24G10590 Striga asiatica
SGA_v2.0_scaffold61G21173 Striga asiatica
Solyc06g065260.3 Solanum lycopersicum
Solyc11g020280.2 Solanum lycopersicum
Sopen06g023760 Solanum pennellii
Sopen11g010570 Solanum pennellii
Sp5g27270 Schrenkiella parvula
TAR628G1096 Trochodendron aralioides
THA.LOC104809726 Tarenaya hassleriana
THA.LOC104819059 Tarenaya hassleriana
Thecc.08G194700 Theobroma cacao
Thhalv10018075m.g Eutrema salsugineum
TPR.G1903 Trifolium pratense
TWI23G0129 Tripterygium wilfordii
TWI59G1417 Tripterygium wilfordii
vmacro00972 Vaccinium macrocarpon
VMungo0251G1859 Vigna mungo
VMungo1127G0186 Vigna mungo
Zm00001eb145890 Zea mays
Zm00001eb167820 Zea mays

User provided reference genes

Program Settings