Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p36260 Brassica napus
Aa31LG6G4350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1200 Anthoceros agrestis
Actinidia04020 Actinidia chinensis
Actinidia31182 Actinidia chinensis
Ah.02g131280 Amaranthus hybridus
AL2G29120 Arabidopsis lyrata
Aqoxy3G03277 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DYUN2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FS95PS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T04E6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X74CZZ Arachis hypogaea
AT1G69830 Arabidopsis thaliana
ATR1120G063 Amborella trichopoda
Atru.chr11.1844 Acer truncatum
AUR62005729 Chenopodium quinoa
AUR62028831 Chenopodium quinoa
BcaB03g14761 Brassica carinata
BcaC08g46429 Brassica carinata
BolC6t39434H Brassica oleracea
BraA07t31198Z Brassica rapa
C06p43620 Brassica napus
CAN.G279.13 Capsicum annuum
CANSAT64G0240 Cannabis sativa
CARHR062910 Cardamine hirsuta
Carub.0002s1652 Capsella rubella
Ca_04744_v3 Cicer arietinum L.
Ca_22859_v3 Cicer arietinum L.
CBR_g17035 Chara braunii
Cc11_g13430 Coffea canephora
CDE04G0949 Ceratophyllum demersum
CDE06G2429 Ceratophyllum demersum
CDE06G2643 Ceratophyllum demersum
CDE07G0280 Ceratophyllum demersum
Cfa009027 Carpinus fangiana
Cfa009028 Carpinus fangiana
Cfa009029 Carpinus fangiana
Ciclev10030661m.g Citrus clementina
CiPaw.05G139400 Carya illinoinensis
CiPaw.06G081000 Carya illinoinensis
ClCG05G024550 Citrullus lanatus
COL.COLO4_07928 Corchorus olitorius
Cpa.g.sc5.271 Carica papaya
CsaV3_5G032400 Cucumis sativus L.
CSS0016919 Camellia sinensis var. sinensis
CSS0035472 Camellia sinensis var. sinensis
DCAR_027388 Daucus carota
Dinv24958 Davidia involucrata
Duzib248G1546 Durio zibethinus
Duzib251G0295 Durio zibethinus
Duzib268G0604 Durio zibethinus
ECA246G2169 Erigeron canadensis
EL10Ac6g13156 Beta vulgaris
Eucgr.G02543 Eucalyptus grandis
FAN07G2190 Fragaria x ananassa
FAN12G0310 Fragaria x ananassa
FAN22G1876 Fragaria x ananassa
FvH4_4g31910 Fragaria vesca
Glyma.02G020500 Glycine max
Glyma.08G296800 Glycine max
Glyma.18G125300 Glycine max
Gohir.A03G098400 Gossypium hirsutum
Gohir.A12G166500 Gossypium hirsutum
Gohir.D02G114700 Gossypium hirsutum
Gohir.D12G170000 Gossypium hirsutum
Gorai.005G139200 Gossypium raimondii
Gorai.008G182600 Gossypium raimondii
GSVIVG01020069001 Vitis vinifera
HanXRQChr07g0191921 Helianthus annuus
Haze_12057 Corylus avellana
HPP92_007664 Vanilla planifolia
HPP92_007665 Vanilla planifolia
Hund05909 Selenicereus undatus
Hund25267 Selenicereus undatus
Lalb_Chr05g0230231 Lupinus albus
Lalb_Chr05g0230241 Lupinus albus
Lalb_Chr10g0097991 Lupinus albus
Lj2g0003595 Lotus japonicus
Lj3A1042T89 Lonicera japonica
Lj4g0022586 Lotus japonicus
Lj6A74T33 Lonicera japonica
Lj6A793T95 Lonicera japonica
Lj6C74T13 Lonicera japonica
Lj6C8T1 Lonicera japonica
Lsat_1_v5_gn_3_51421 Lactuca sativa
Lsat_1_v5_gn_8_54140 Lactuca sativa
Manes.01G189800 Manihot esculenta
Manes.05G097100 Manihot esculenta
MCO13G310 Micromonas commoda
MD13G1078600 Malus domestica
MD16G1078200 Malus domestica
Medtr8g468990 Medicago truncatula
MELO3C012071.2 Cucumis melo
Migut.E00112 Erythranthe guttata
MSTRG.674 Avicennia marina
MSTRG.7822 Avicennia marina
Nitab4.5_0000879g0090 Nicotiana tabacum
Nitab4.5_0010498g0010 Nicotiana tabacum
Nn3g17137 Nelumbo nucifera
Nn4g23056 Nelumbo nucifera
Oeu040122.2 Olea europaea
Os01g0715400 Oryza sativa ssp. japonica
Peaxi162Scf00209g00331 Petunia axillaris
PGR119G1594 Punica granatum
Phvul.002G065700 Phaseolus vulgaris
Phvul.003G069200 Phaseolus vulgaris
Potri.010G092900 Populus trichocarpa
Prupe.1G268300 Prunus persica
Psat4g132240 Pisum sativum
PSO017G0411 Papaver somniferum
PSO478G1338 Papaver somniferum
PSO591G0257 Papaver somniferum
PSO832G2404 Papaver somniferum
QL03p065556 Quercus lobata
RcHm_v2.0_Chr4g0440561 Rosa chinensis
Rhsim12G0130100 Rhododendron simsii
Sabra10G0065700 Salix brachista
SalBow2G3062 Salvia bowleyana
Sc04g0008440 Simmondsia chinensis
Sed0014431 Sechium edule
SEGI_26523 Sequoiadendron giganteum
SGA_v2.0_scaffold302G47859 Striga asiatica
Solyc05g007070.2 Solanum lycopersicum
Sopen05g003040 Solanum pennellii
Sp5g24940 Schrenkiella parvula
TAR371G0512 Trochodendron aralioides
TAR629G2838 Trochodendron aralioides
THA.LOC104822100 Tarenaya hassleriana
Thecc.02G354600 Theobroma cacao
Thhalv10018099m.g Eutrema salsugineum
TPR.G33281 Trifolium pratense
TWI36G1755 Tripterygium wilfordii
TWI75G1868 Tripterygium wilfordii
unitig_26.g10315 Utricularia gibba
vmacro16327 Vaccinium macrocarpon
VMungo0251G1110 Vigna mungo
VMungo1215G1269 Vigna mungo
Zm00001eb154950 Zea mays

User provided reference genes

Program Settings