Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20880 Brassica napus
A07p42410 Brassica napus
Aa31LG4G6840 Aethionema arabicum
Aa31LG4G6850 Aethionema arabicum
Actinidia11213 Actinidia chinensis
Actinidia17789 Actinidia chinensis
Actinidia29532 Actinidia chinensis
AL2G36920 Arabidopsis lyrata
Aqoxy5G02077 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3DXP20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.661UAU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea
AT1G76770 Arabidopsis thaliana
AT1G76780 Arabidopsis thaliana
ATR0820G162 Amborella trichopoda
Atru.chr13.2099 Acer truncatum
AUR62013591 Chenopodium quinoa
AUR62026703 Chenopodium quinoa
BcaB05g25009 Brassica carinata
BcaC03g15700 Brassica carinata
BcaC03g15701 Brassica carinata
BolC6t40122H Brassica oleracea
BraA02t07119Z Brassica rapa
BraA07t31767Z Brassica rapa
C02p32790 Brassica napus
C06p50980 Brassica napus
CAN.G18.12 Capsicum annuum
CAN.G268.26 Capsicum annuum
CANSAT25G1562 Cannabis sativa
CARHR070310 Cardamine hirsuta
Carub.0002s2368 Capsella rubella
Ca_10684_v3 Cicer arietinum L.
Ca_27679_v3 Cicer arietinum L.
Cc10_g14420 Coffea canephora
CDE02G4447 Ceratophyllum demersum
CDE08G0940 Ceratophyllum demersum
Cfa018319 Carpinus fangiana
Ciclev10003945m.g Citrus clementina
CiPaw.15G015900 Carya illinoinensis
CiPaw.16G012200 Carya illinoinensis
ClCG09G010170 Citrullus lanatus
COL.COLO4_08566 Corchorus olitorius
Cpa.g.sc21.205 Carica papaya
CsaV3_7G024560 Cucumis sativus L.
CsaV3_7G024570 Cucumis sativus L.
CSS0002508 Camellia sinensis var. sinensis
CSS0020035 Camellia sinensis var. sinensis
CSS0021128 Camellia sinensis var. sinensis
DCAR_001139 Daucus carota
DCAR_014441 Daucus carota
Dinv25870 Davidia involucrata
Duzib041G0461 Durio zibethinus
ECA232G5004 Erigeron canadensis
EL10Ac1g01555 Beta vulgaris
Eucgr.F02701 Eucalyptus grandis
FAN15G2695 Fragaria x ananassa
FAN20G3127 Fragaria x ananassa
FAN24G0150 Fragaria x ananassa
FAN27G0674 Fragaria x ananassa
FvH4_2g13660 Fragaria vesca
Glyma.02G081300 Glycine max
Glyma.10G224400 Glycine max
Glyma.16G166700 Glycine max
Glyma.20G167400 Glycine max
Gohir.A05G243801 Gossypium hirsutum
Gohir.D05G244833 Gossypium hirsutum
Gorai.009G254600 Gossypium raimondii
GSVIVG01034537001 Vitis vinifera
GSVIVG01034538001 Vitis vinifera
HanXRQChr05g0161961 Helianthus annuus
Haze_17757 Corylus avellana
HPP92_004419 Vanilla planifolia
HPP92_004420 Vanilla planifolia
HPP92_004421 Vanilla planifolia
HPP92_004422 Vanilla planifolia
Hund17437 Selenicereus undatus
Lalb_Chr19g0130231 Lupinus albus
Lalb_Chr21g0305491 Lupinus albus
Lj2g0024086 Lotus japonicus
Lj5g0003985 Lotus japonicus
Lsat_1_v5_gn_6_100581 Lactuca sativa
Lsat_1_v5_gn_9_40940 Lactuca sativa
Manes.02G179900 Manihot esculenta
MBI09_g40721_MAGBIO Magnolia biondii
MBI09_g45000_MAGBIO Magnolia biondii
MD05G1026800 Malus domestica
MD10G1026100 Malus domestica
Medtr1246s0010 Medicago truncatula
Medtr1g098690 Medicago truncatula
MELO3C024076.2 Cucumis melo
Migut.N03213 Erythranthe guttata
Nitab4.5_0001062g0060 Nicotiana tabacum
Nitab4.5_0004505g0020 Nicotiana tabacum
Nitab4.5_0010749g0010 Nicotiana tabacum
Nn1g06075 Nelumbo nucifera
Nn5g28757 Nelumbo nucifera
Oeu011949.1 Olea europaea
Os12g0165200 Oryza sativa ssp. japonica
Peaxi162Scf00599g00049 Petunia axillaris
Peaxi162Scf01294g00121 Petunia axillaris
PGR042G2442 Punica granatum
PGSC0003DMG400024099 Solanum tuberosum
PGSC0003DMG402010796 Solanum tuberosum
Phvul.004G094700 Phaseolus vulgaris
Phvul.007G080300 Phaseolus vulgaris
Potri.002G067700 Populus trichocarpa
Potri.005G192700 Populus trichocarpa
Prupe.8G031300 Prunus persica
Psat1g101840 Pisum sativum
Psat6g192600 Pisum sativum
PSO210G0022 Papaver somniferum
PSO447G0326 Papaver somniferum
QL02p039039 Quercus lobata
RcHm_v2.0_Chr6g0275301 Rosa chinensis
Rhsim11G0083400 Rhododendron simsii
Sabra05G0147300 Salix brachista
SalBow6G1825 Salvia bowleyana
Sc02g0004040 Simmondsia chinensis
Sc26g0002570 Simmondsia chinensis
Sed0006497 Sechium edule
Sed0010283 Sechium edule
SEGI_01966 Sequoiadendron giganteum
Solyc04g071490.3 Solanum lycopersicum
Solyc12g056560.2 Solanum lycopersicum
Sopen04g027460 Solanum pennellii
Sopen12g029170 Solanum pennellii
Sp5g31920 Schrenkiella parvula
THA.LOC104812037 Tarenaya hassleriana
THA.LOC104813717 Tarenaya hassleriana
Thecc.08G153500 Theobroma cacao
TWI60G0101 Tripterygium wilfordii
TWI60G1058 Tripterygium wilfordii
unitig_52.g17530 Utricularia gibba
vmacro01456 Vaccinium macrocarpon
VMungo0464G2160 Vigna mungo
VMungo0720G2917 Vigna mungo
Zm00001eb139380 Zea mays

User provided reference genes

Program Settings