Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p33250 Brassica napus
A09p64380 Brassica napus
Aa31LG1G3010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1707 Anthoceros agrestis
Actinidia08233 Actinidia chinensis
Actinidia27905 Actinidia chinensis
Ah.01g006210 Amaranthus hybridus
AL1G22920 Arabidopsis lyrata
Aqoxy5G01669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C0SPFI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V16GGA Arachis hypogaea
AT1G11750 Arabidopsis thaliana
ATR0733G015 Amborella trichopoda
Atru.chr5.2991 Acer truncatum
AUR62011340 Chenopodium quinoa
AUR62016720 Chenopodium quinoa
AUR62032494 Chenopodium quinoa
BcaB03g13235 Brassica carinata
BcaB08g37415 Brassica carinata
BcaC01g01075 Brassica carinata
BcaC07g41763 Brassica carinata
BolC8t49123H Brassica oleracea
BolC8t52339H Brassica oleracea
BraA08t35244Z Brassica rapa
BraA09t41782Z Brassica rapa
C08p14940 Brassica napus
C08p48010 Brassica napus
CAN.G1.47 Capsicum annuum
CAN.G713.22 Capsicum annuum
CANSAT11G1479 Cannabis sativa
CARHR012060 Cardamine hirsuta
Carub.0001s1140 Capsella rubella
CBR_g30632 Chara braunii
Cc02_g17740 Coffea canephora
CDE06G1303 Ceratophyllum demersum
Cfa005020 Carpinus fangiana
Cfa016081 Carpinus fangiana
Ciclev10029044m.g Citrus clementina
CiPaw.05G063000 Carya illinoinensis
ClCG11G004510 Citrullus lanatus
COL.COLO4_32437 Corchorus olitorius
Cpa.g.sc62.130 Carica papaya
Cre06.g299650 Chlamydomonas reinhardtii
CsaV3_2G014590 Cucumis sativus L.
CSS0021318 Camellia sinensis var. sinensis
CSS0029094 Camellia sinensis var. sinensis
DCAR_028994 Daucus carota
Dinv23541 Davidia involucrata
Dinv42081 Davidia involucrata
Duzib248G1140 Durio zibethinus
ECA234G3740 Erigeron canadensis
EL10Ac9g21741 Beta vulgaris
Eucgr.G01655 Eucalyptus grandis
FAN15G1049 Fragaria x ananassa
FAN20G0300 Fragaria x ananassa
FAN24G0069 Fragaria x ananassa
FAN27G1550 Fragaria x ananassa
FvH4_2g13930 Fragaria vesca
Glyma.11G119300 Glycine max
Glyma.12G044500 Glycine max
Gohir.A03G179200 Gossypium hirsutum
Gohir.A04G116800 Gossypium hirsutum
Gohir.D02G202819 Gossypium hirsutum
Gohir.D04G158400 Gossypium hirsutum
Gorai.005G228000 Gossypium raimondii
Gorai.012G145900 Gossypium raimondii
GSVIVG01031936001 Vitis vinifera
HanXRQChr10g0307251 Helianthus annuus
Haze_00363 Corylus avellana
Haze_02369 Corylus avellana
Hma1.2p1_1375F.1_g279000 Hydrangea macrophylla
Hma1.2p1_3179F.1_g333685 Hydrangea macrophylla
Hma1.2p1_3179F.1_g333690 Hydrangea macrophylla
HPP92_012278 Vanilla planifolia
HPP92_012293 Vanilla planifolia
Hund00282 Selenicereus undatus
Lalb_Chr01g0002651 Lupinus albus
Lj3g0027785 Lotus japonicus
Lj9A368G52 Lonicera japonica
Lsat_1_v5_gn_0_9801 Lactuca sativa
Lsat_1_v5_gn_4_146021 Lactuca sativa
Lsat_1_v5_gn_5_117920 Lactuca sativa
Manes.14G074700 Manihot esculenta
Mapoly0041s0035 Marchantia polymorpha
MBI16_g37745_MAGBIO Magnolia biondii
MD05G1045200 Malus domestica
MD10G1052100 Malus domestica
Medtr4g069800 Medicago truncatula
MELO3C020985.2 Cucumis melo
Migut.B00250 Erythranthe guttata
MSTRG.16798 Avicennia marina
Nitab4.5_0001361g0150 Nicotiana tabacum
Nitab4.5_0005152g0060 Nicotiana tabacum
Nn2g12776 Nelumbo nucifera
Oeu020767.2 Olea europaea
Os03g0411500 Oryza sativa ssp. japonica
Peaxi162Scf00003g01332 Petunia axillaris
PGR042G1654 Punica granatum
PGR142G2271 Punica granatum
PGSC0003DMG400033910 Solanum tuberosum
Phvul.011G046500 Phaseolus vulgaris
Potri.004G152900 Populus trichocarpa
Potri.009G114001 Populus trichocarpa
Pp3c25_15340 Physcomitrium patens
Pp3c5_28650 Physcomitrium patens
Prupe.8G061700 Prunus persica
Psat7g141880 Pisum sativum
PSO170G5773 Papaver somniferum
PSO700G0046 Papaver somniferum
QL03p043522 Quercus lobata
QL11p042591 Quercus lobata
QL11p043210 Quercus lobata
RcHm_v2.0_Chr6g0275681 Rosa chinensis
Rhsim05G0075000 Rhododendron simsii
Sabra04G0101300 Salix brachista
Sabra09G0087500 Salix brachista
SalBow5G4161 Salvia bowleyana
SalBow6G0119 Salvia bowleyana
SalBow6G2386 Salvia bowleyana
Sc08g0000420 Simmondsia chinensis
Sed0001211 Sechium edule
SEGI_36014 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20550 Striga asiatica
SMO118G0103 Selaginella moellendorffii
Solyc10g051310.2 Solanum lycopersicum
Sopen10g022990 Solanum pennellii
Sp1g10360 Schrenkiella parvula
TAR625G1320 Trochodendron aralioides
THA.LOC104818778 Tarenaya hassleriana
Thecc.02G124100 Theobroma cacao
Thhalv10008442m.g Eutrema salsugineum
TPR.G9005 Trifolium pratense
TWI31G0696 Tripterygium wilfordii
TWI75G1411 Tripterygium wilfordii
unitig_60.g25857 Utricularia gibba
vmacro17502 Vaccinium macrocarpon
VMungo1127G1092 Vigna mungo
Zm00001eb258210 Zea mays

User provided reference genes

Program Settings