Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15670 Brassica napus
Aa31LG7G4150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis
Actinidia02437 Actinidia chinensis
Actinidia02438 Actinidia chinensis
Actinidia08422 Actinidia chinensis
Actinidia10388 Actinidia chinensis
Ah.08g210690 Amaranthus hybridus
AL1G32240 Arabidopsis lyrata
Aqoxy4G02826 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea
AT1G19490 Arabidopsis thaliana
ATR0820G116 Amborella trichopoda
ATR0820G165 Amborella trichopoda
Atru.chr8.1591 Acer truncatum
Atru.chr8.1592 Acer truncatum
AUR62028570 Chenopodium quinoa
AUR62033525 Chenopodium quinoa
BcaB03g14441 Brassica carinata
BcaC05g25849 Brassica carinata
BolC7t42914H Brassica oleracea
BolC7t42915H Brassica oleracea
BraA06t24676Z Brassica rapa
C05p17910 Brassica napus
C07p23910 Brassica napus
C07p23920 Brassica napus
C07p23930 Brassica napus
CAN.G397.46 Capsicum annuum
CANSAT80G2511 Cannabis sativa
CARHR020060 Cardamine hirsuta
Carub.0001s1906 Capsella rubella
Ca_08983_v3 Cicer arietinum L.
Cc08_g02550 Coffea canephora
CDE06G2195 Ceratophyllum demersum
CDE08G0293 Ceratophyllum demersum
CDE08G1266 Ceratophyllum demersum
Cfa016575 Carpinus fangiana
Ciclev10013541m.g Citrus clementina
CiPaw.09G010900 Carya illinoinensis
CiPaw.10G007200 Carya illinoinensis
ClCG10G019160 Citrullus lanatus
COL.COLO4_29783 Corchorus olitorius
Cpa.g.sc5.51 Carica papaya
CsaV3_3G037090 Cucumis sativus L.
CSS0012282 Camellia sinensis var. sinensis
DCAR_009151 Daucus carota
DCAR_020766 Daucus carota
Dinv21230 Davidia involucrata
Dinv31662 Davidia involucrata
Duzib093G0027 Durio zibethinus
Duzib128G1345 Durio zibethinus
EL10Ac7g16952 Beta vulgaris
Eucgr.K02060 Eucalyptus grandis
Eucgr.K02061 Eucalyptus grandis
FAN02G2015 Fragaria x ananassa
FAN05G0202 Fragaria x ananassa
FAN05G5667 Fragaria x ananassa
FAN09G0635 Fragaria x ananassa
FAN14G2174 Fragaria x ananassa
FAN14G2179 Fragaria x ananassa
FvH4_6g18250 Fragaria vesca
Glyma.03G193300 Glycine max
Glyma.17G197300 Glycine max
Glyma.19G084800 Glycine max
Glyma.19G193400 Glycine max
Gohir.A04G064600 Gossypium hirsutum
Gohir.D04G102100 Gossypium hirsutum
Gorai.009G405400 Gossypium raimondii
GSVIVG01033811001 Vitis vinifera
HanXRQChr14g0432701 Helianthus annuus
HanXRQChr16g0518951 Helianthus annuus
Haze_19571 Corylus avellana
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla
HPP92_009043 Vanilla planifolia
Hund14853 Selenicereus undatus
Lalb_Chr20g0112081 Lupinus albus
Lj1g0021236 Lotus japonicus
Lj2A133G43 Lonicera japonica
Lj3A1000G63 Lonicera japonica
Lsat_1_v5_gn_2_22561 Lactuca sativa
Lsat_1_v5_gn_6_66321 Lactuca sativa
Manes.09G059527 Manihot esculenta
Mapoly0016s0098 Marchantia polymorpha
MBI17_g31309_MAGBIO Magnolia biondii
MD12G1022300 Malus domestica
MD14G1019200 Malus domestica
Medtr7g104190 Medicago truncatula
MELO3C009455.2 Cucumis melo
MSTRG.10360 Avicennia marina
Nitab4.5_0000794g0130 Nicotiana tabacum
Nitab4.5_0005756g0030 Nicotiana tabacum
Nitab4.5_0011780g0020 Nicotiana tabacum
Nn2g14077 Nelumbo nucifera
Nn6g34983 Nelumbo nucifera
Oeu040522.1 Olea europaea
Oeu056908.1 Olea europaea
Os02g0578500 Oryza sativa ssp. japonica
Os11g0154900 Oryza sativa ssp. japonica
Peaxi162Scf00752g00310 Petunia axillaris
Peaxi162Scf36127g00005 Petunia axillaris
PGR142G2241 Punica granatum
PGSC0003DMG400028166 Solanum tuberosum
PGSC0003DMG402008883 Solanum tuberosum
Phvul.001G188300 Phaseolus vulgaris
Potri.006G114600 Populus trichocarpa
Pp3c14_6250 Physcomitrium patens
Pp3c17_11650 Physcomitrium patens
Prupe.7G114400 Prunus persica
Psat3g034880 Pisum sativum
PSO339G0823 Papaver somniferum
PSO384G3501 Papaver somniferum
QL07p039646 Quercus lobata
QL07p039701 Quercus lobata
RcHm_v2.0_Chr3g0472661 Rosa chinensis
Rhsim03G0078100 Rhododendron simsii
Sabra06G0089500 Salix brachista
SalBow3G2059 Salvia bowleyana
Sc07g0005480 Simmondsia chinensis
Sc20g0006160 Simmondsia chinensis
Sed0026834 Sechium edule
SMO351G0354 Selaginella moellendorffii
Solyc09g009760.1 Solanum lycopersicum
Solyc10g083380.2 Solanum lycopersicum
Sopen09g004520 Solanum pennellii
Sopen10g032880 Solanum pennellii
Sp1g17370 Schrenkiella parvula
TAR623G0330 Trochodendron aralioides
THA.LOC104804992 Tarenaya hassleriana
Thecc.05G085400 Theobroma cacao
Thhalv10009681m.g Eutrema salsugineum
TPR.G19527 Trifolium pratense
TWI53G0330 Tripterygium wilfordii
TWI74G0342 Tripterygium wilfordii
unitig_22.g5122 Utricularia gibba
VMungo1383G0830 Vigna mungo
Zm00001eb092580 Zea mays
Zm00001eb197160 Zea mays
Zm00001eb406920 Zea mays

User provided reference genes

Program Settings