Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p54330 Brassica napus
Aa31LG10G16270 Aethionema arabicum
Actinidia17918 Actinidia chinensis
Actinidia20978 Actinidia chinensis
Ah.05g168400 Amaranthus hybridus
AL2G23460 Arabidopsis lyrata
AL5G45080 Arabidopsis lyrata
Aqoxy5G02690 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea
AT3G62330 Arabidopsis thaliana
ATR0693G434 Amborella trichopoda
Atru.chr5.963 Acer truncatum
AUR62022309 Chenopodium quinoa
AUR62032106 Chenopodium quinoa
AUR62034930 Chenopodium quinoa
BcaC03g15843 Brassica carinata
BcaNung00812 Brassica carinata
BolC2t11869H Brassica oleracea
BolC5t33669H Brassica oleracea
BolC8t51298H Brassica oleracea
BraA09t40845Z Brassica rapa
C02p35770 Brassica napus
C02p58000 Brassica napus
C08p37210 Brassica napus
CAN.G1058.28 Capsicum annuum
CANSAT25G1874 Cannabis sativa
CARHR172660 Cardamine hirsuta
Carub.0005s2904 Capsella rubella
Ca_09223_v3 Cicer arietinum L.
CBR_g31172 Chara braunii
CBR_g39750 Chara braunii
Cc08_g12410 Coffea canephora
CDE02G4238 Ceratophyllum demersum
Ciclev10023332m.g Citrus clementina
CiPaw.07G119700 Carya illinoinensis
CiPaw.08G087500 Carya illinoinensis
ClCG10G011590 Citrullus lanatus
COL.COLO4_23201 Corchorus olitorius
Cpa.g.sc18.85 Carica papaya
CsaV3_3G026570 Cucumis sativus L.
CSS0024762 Camellia sinensis var. sinensis
CSS0026378 Camellia sinensis var. sinensis
DCAR_002882 Daucus carota
Dinv33136 Davidia involucrata
Duzib133G0199 Durio zibethinus
Duzib138G0780 Durio zibethinus
ECA247G2785 Erigeron canadensis
EL10Ac1g01717 Beta vulgaris
Eucgr.K03554 Eucalyptus grandis
FAN19G1535 Fragaria x ananassa
FAN23G1709 Fragaria x ananassa
FAN26G2795 Fragaria x ananassa
FAN28G0451 Fragaria x ananassa
FAN28G0588 Fragaria x ananassa
FvH4_1g26940 Fragaria vesca
Glyma.03G221000 Glycine max
Glyma.19G218000 Glycine max
Gohir.A07G129400 Gossypium hirsutum
Gohir.D07G133700 Gossypium hirsutum
Gorai.001G145000 Gossypium raimondii
GSVIVG01028150001 Vitis vinifera
HanXRQChr10g0284731 Helianthus annuus
Haze_05075 Corylus avellana
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla
HPP92_012783 Vanilla planifolia
HPP92_012784 Vanilla planifolia
Hund17504 Selenicereus undatus
Lalb_Chr18g0046571 Lupinus albus
Lj1A15T56 Lonicera japonica
Lj1g0015719 Lotus japonicus
Lsat_1_v5_gn_3_89981 Lactuca sativa
Lsat_1_v5_gn_8_166621 Lactuca sativa
Manes.01G230200 Manihot esculenta
Mapoly0068s0092 Marchantia polymorpha
MBI18_g35540_MAGBIO Magnolia biondii
MD09G1285600 Malus domestica
MD17G1278200 Malus domestica
MELO3C012930.2 Cucumis melo
Migut.A00953 Erythranthe guttata
MSTRG.12100 Avicennia marina
MSTRG.25523 Avicennia marina
Nitab4.5_0000312g0040 Nicotiana tabacum
Nitab4.5_0014313g0030 Nicotiana tabacum
Nn3g21757 Nelumbo nucifera
Nn3g21758 Nelumbo nucifera
Nn4g25538 Nelumbo nucifera
Oeu002340.2 Olea europaea
Oeu040211.2 Olea europaea
Os01g0252900 Oryza sativa ssp. japonica
Peaxi162Scf00174g00140 Petunia axillaris
PGR044G1849 Punica granatum
PGSC0003DMG400004761 Solanum tuberosum
Phvul.001G214600 Phaseolus vulgaris
Potri.002G192800 Populus trichocarpa
Potri.014G118100 Populus trichocarpa
Pp3c1_21140 Physcomitrium patens
Pp3c2_16330 Physcomitrium patens
Prupe.3G008300 Prunus persica
Psat3g018920 Pisum sativum
PSO210G2075 Papaver somniferum
PSO761G0671 Papaver somniferum
QL12p019002 Quercus lobata
RcHm_v2.0_Chr3g0487181 Rosa chinensis
Rhsim13G0003100 Rhododendron simsii
Sabra02G0163100 Salix brachista
Sc05g0000300 Simmondsia chinensis
Sed0012344 Sechium edule
SEGI_21105 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32887 Striga asiatica
SGA_v2.0_scaffold146G36149 Striga asiatica
SHI33189 Sapria himalayana
SMO001G0015 Selaginella moellendorffii
SMO220G0002 Selaginella moellendorffii
SMO236G0022 Selaginella moellendorffii
SMO307G0076 Selaginella moellendorffii
SMO337G0035 Selaginella moellendorffii
SMO337G0116 Selaginella moellendorffii
SMO340G0240 Selaginella moellendorffii
SMO356G0606 Selaginella moellendorffii
Solyc08g078610.4 Solanum lycopersicum
Sopen08g027090 Solanum pennellii
Sp5g01060 Schrenkiella parvula
TAR362G0299 Trochodendron aralioides
TAR365G0405 Trochodendron aralioides
TAR633G0114 Trochodendron aralioides
THA.LOC104802145 Tarenaya hassleriana
THA.LOC104817449 Tarenaya hassleriana
Thecc.01G317000 Theobroma cacao
Thhalv10005921m.g Eutrema salsugineum
TPR.G4094 Trifolium pratense
TWI36G1268 Tripterygium wilfordii
TWI75G1100 Tripterygium wilfordii
unitig_21.g20328 Utricularia gibba
vmacro02386 Vaccinium macrocarpon
VMungo1383G3312 Vigna mungo
Zm00001eb333730 Zea mays

User provided reference genes

Program Settings