Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02040 Brassica napus
A10p24680 Brassica napus
Actinidia29198 Actinidia chinensis
AL6G24200 Arabidopsis lyrata
Aqoxy2G01934 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea
AT5G13590 Arabidopsis thaliana
ATR0681G260 Amborella trichopoda
Atru.chr12.593 Acer truncatum
BcaC04g19099 Brassica carinata
BcaC04g19101 Brassica carinata
BcaNung01143 Brassica carinata
BcaNung01899 Brassica carinata
BcaNung01900 Brassica carinata
BcaNung06336 Brassica carinata
BolC2t06571H Brassica oleracea
BolC9t59195H Brassica oleracea
BraA02t05176Z Brassica rapa
BraA10t44531Z Brassica rapa
C02p06270 Brassica napus
C09p63510 Brassica napus
CAN.G786.35 Capsicum annuum
CANSAT56G3782 Cannabis sativa
CARHR199850 Cardamine hirsuta
Carub.0006s1175 Capsella rubella
Ca_11324_v3 Cicer arietinum L.
Cc02_g08660 Coffea canephora
CDE04G2023 Ceratophyllum demersum
CDE07G1705 Ceratophyllum demersum
Ciclev10033332m.g Citrus clementina
CiPaw.01G279600 Carya illinoinensis
CiPaw.02G178500 Carya illinoinensis
ClCG09G020310 Citrullus lanatus
ClCG09G020330 Citrullus lanatus
COL.COLO4_10625 Corchorus olitorius
COL.COLO4_26050 Corchorus olitorius
COL.COLO4_29238 Corchorus olitorius
COL.COLO4_31476 Corchorus olitorius
Cpa.g.sc1.301 Carica papaya
Cpa.g.sc1.302 Carica papaya
CsaV3_5G026060 Cucumis sativus L.
CsaV3_5G026070 Cucumis sativus L.
CsaV3_5G026100 Cucumis sativus L.
CSS0006513 Camellia sinensis var. sinensis
CSS0040218 Camellia sinensis var. sinensis
DCAR_010662 Daucus carota
Duzib106G1116 Durio zibethinus
Duzib114G0075 Durio zibethinus
Eucgr.G02778 Eucalyptus grandis
FAN03G1488 Fragaria x ananassa
FAN06G0550 Fragaria x ananassa
FAN06G2682 Fragaria x ananassa
FvH4_7g20760 Fragaria vesca
Glyma.10G292400 Glycine max
Glyma.20G242400 Glycine max
Gohir.A05G352800 Gossypium hirsutum
Gohir.D04G060201 Gossypium hirsutum
Gorai.012G066900 Gossypium raimondii
GSVIVG01032629001 Vitis vinifera
Haze_16971 Corylus avellana
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla
Lalb_Chr02g0143831 Lupinus albus
Lalb_Chr02g0143851 Lupinus albus
Lj5g0015824 Lotus japonicus
Lj8A92T85 Lonicera japonica
Manes.10G039200 Manihot esculenta
Manes.10G039300 Manihot esculenta
MD01G1117200 Malus domestica
MD07G1184600 Malus domestica
Medtr1g115950 Medicago truncatula
MELO3C025488.2 Cucumis melo
MELO3C025491.2 Cucumis melo
MELO3C025492.2 Cucumis melo
Migut.F00680 Erythranthe guttata
MSTRG.27328 Avicennia marina
MSTRG.8954 Avicennia marina
Nitab4.5_0006737g0060 Nicotiana tabacum
Nitab4.5_0007221g0010 Nicotiana tabacum
Nn2g11490 Nelumbo nucifera
Oeu025162.3 Olea europaea
Peaxi162Scf00135g00027 Petunia axillaris
PGSC0003DMG400011471 Solanum tuberosum
PGSC0003DMG400011472 Solanum tuberosum
PGSC0003DMG400011483 Solanum tuberosum
PGSC0003DMG400011484 Solanum tuberosum
PGSC0003DMG400011487 Solanum tuberosum
PGSC0003DMG400011488 Solanum tuberosum
PGSC0003DMG400011490 Solanum tuberosum
PGSC0003DMG400011491 Solanum tuberosum
PGSC0003DMG400011503 Solanum tuberosum
PGSC0003DMG400037112 Solanum tuberosum
PGSC0003DMG400039757 Solanum tuberosum
PGSC0003DMG400042471 Solanum tuberosum
Phvul.007G007900 Phaseolus vulgaris
Potri.008G047600 Populus trichocarpa
Potri.010G213800 Populus trichocarpa
Prupe.2G224500 Prunus persica
Psat6g238520 Pisum sativum
PSO478G2008 Papaver somniferum
PSO782G0271 Papaver somniferum
QL08p057512 Quercus lobata
RcHm_v2.0_Chr1g0365001 Rosa chinensis
Rhsim09G0155800 Rhododendron simsii
Sabra08G0033700 Salix brachista
Sabra10G0165500 Salix brachista
SalBow1G1128 Salvia bowleyana
SalBow5G2092 Salvia bowleyana
SalBow6G2235 Salvia bowleyana
SalBow8G4020 Salvia bowleyana
SalBow8G4750 Salvia bowleyana
SalBow8G5252 Salvia bowleyana
Sed0006338 Sechium edule
Sed0026677 Sechium edule
SGA_v2.0_scaffold44G16695 Striga asiatica
SGA_v2.0_scaffold44G16697 Striga asiatica
SGA_v2.0_scaffold60G20995 Striga asiatica
Solyc04g010130.1 Solanum lycopersicum
Solyc04g010140.1 Solanum lycopersicum
Solyc04g010155.2 Solanum lycopersicum
Solyc04g010180.4 Solanum lycopersicum
Solyc04g010185.1 Solanum lycopersicum
Sopen04g005270 Solanum pennellii
Sopen04g005280 Solanum pennellii
Sopen04g005300 Solanum pennellii
Sopen04g005310 Solanum pennellii
Sopen04g005330 Solanum pennellii
Sopen04g005350 Solanum pennellii
Sopen04g005360 Solanum pennellii
Sp6g30440 Schrenkiella parvula
TAR633G0056 Trochodendron aralioides
TAR636G0162 Trochodendron aralioides
THA.LOC104799366 Tarenaya hassleriana
THA.LOC104809887 Tarenaya hassleriana
Thecc.10G063100 Theobroma cacao
Thhalv10012490m.g Eutrema salsugineum
TPR.G10427 Trifolium pratense
TWI38G0559 Tripterygium wilfordii
VMungo0720G0439 Vigna mungo

User provided reference genes

Program Settings