Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p41720 Brassica napus
Aa31LG7G7010 Aethionema arabicum
Actinidia14956 Actinidia chinensis
Actinidia15253 Actinidia chinensis
Actinidia31979 Actinidia chinensis
Actinidia36680 Actinidia chinensis
AL1G36570 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.BFI5I2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3J10V Arachis hypogaea
AT1G23000 Arabidopsis thaliana
ATR0686G033 Amborella trichopoda
BcaB07g32297 Brassica carinata
BcaB07g32298 Brassica carinata
BcaC05g26212 Brassica carinata
BolC5t30922H Brassica oleracea
BraA09t39661Z Brassica rapa
C05p22210 Brassica napus
CAN.G1334.10 Capsicum annuum
CAN.G541.34 Capsicum annuum
CAN.G625.79 Capsicum annuum
CANSAT78G2416 Cannabis sativa
CARHR023380 Cardamine hirsuta
Carub.0001s2250 Capsella rubella
Cc11_g08860 Coffea canephora
CDE04G1387 Ceratophyllum demersum
CDE06G1986 Ceratophyllum demersum
Cfa007857 Carpinus fangiana
Cfa008592 Carpinus fangiana
Ciclev10013773m.g Citrus clementina
Ciclev10015481m.g Citrus clementina
CiPaw.04G045600 Carya illinoinensis
CiPaw.05G248300 Carya illinoinensis
CiPaw.06G012700 Carya illinoinensis
ClCG01G006110 Citrullus lanatus
COL.COLO4_20462 Corchorus olitorius
Cpa.g.sc211.1 Carica papaya
CsaV3_5G028550 Cucumis sativus L.
CSS0002618 Camellia sinensis var. sinensis
CSS0022597 Camellia sinensis var. sinensis
DCAR_007286 Daucus carota
DCAR_030213 Daucus carota
Dinv05157 Davidia involucrata
Dinv12999 Davidia involucrata
Dinv14870 Davidia involucrata
Duzib248G0732 Durio zibethinus
Duzib251G0101 Durio zibethinus
Duzib268G0327 Durio zibethinus
ECA232G1131 Erigeron canadensis
ECA233G1921 Erigeron canadensis
ECA234G4505 Erigeron canadensis
FAN07G1117 Fragaria x ananassa
FAN12G2402 Fragaria x ananassa
FAN17G1289 Fragaria x ananassa
FAN22G1850 Fragaria x ananassa
FvH4_4g32260 Fragaria vesca
Glyma.10G264000 Glycine max
Glyma.20G126300 Glycine max
GSVIVG01011777001 Vitis vinifera
GSVIVG01030880001 Vitis vinifera
HanXRQChr08g0212661 Helianthus annuus
HanXRQChr10g0317181 Helianthus annuus
HanXRQChr12g0377611 Helianthus annuus
HanXRQChr17g0566971 Helianthus annuus
Haze_11022 Corylus avellana
Haze_14212 Corylus avellana
Hma1.2p1_0464F.1_g158310 Hydrangea macrophylla
Hma1.2p1_0832F.1_g225690 Hydrangea macrophylla
HPP92_000182 Vanilla planifolia
HPP92_011529 Vanilla planifolia
HPP92_013660 Vanilla planifolia
HPP92_024417 Vanilla planifolia
Hund20684 Selenicereus undatus
Lalb_Chr06g0165561 Lupinus albus
Lalb_Chr21g0308471 Lupinus albus
Lj3A874T75 Lonicera japonica
Lj5g0008903 Lotus japonicus
Lj6A748T53 Lonicera japonica
Lsat_1_v5_gn_4_14961 Lactuca sativa
Lsat_1_v5_gn_4_154841 Lactuca sativa
Lsat_1_v5_gn_8_43280 Lactuca sativa
Manes.15G126600 Manihot esculenta
Manes.17G075400 Manihot esculenta
MBI16_g05919_MAGBIO Magnolia biondii
MBI16_g46275_MAGBIO Magnolia biondii
MD16G1029800 Malus domestica
Medtr1g107565 Medicago truncatula
Medtr4g065780 Medicago truncatula
MELO3C005316.2 Cucumis melo
Migut.A00133 Erythranthe guttata
MSTRG.13576 Avicennia marina
MSTRG.2183 Avicennia marina
Nitab4.5_0002248g0010 Nicotiana tabacum
Nitab4.5_0002456g0200 Nicotiana tabacum
Nitab4.5_0004776g0010 Nicotiana tabacum
Nitab4.5_0007425g0040 Nicotiana tabacum
Nn3g18194 Nelumbo nucifera
Nn4g24109 Nelumbo nucifera
Oeu045880.1 Olea europaea
Os01g0125600 Oryza sativa ssp. japonica
Peaxi162Scf00205g00218 Petunia axillaris
Peaxi162Scf00253g00161 Petunia axillaris
Peaxi162Scf00803g00051 Petunia axillaris
PGR102G0828 Punica granatum
PGSC0003DMG400030552 Solanum tuberosum
PGSC0003DMG400030602 Solanum tuberosum
Phvul.007G038000 Phaseolus vulgaris
Potri.004G091700 Populus trichocarpa
Potri.008G128400 Populus trichocarpa
Potri.010G114300 Populus trichocarpa
Prupe.1G323100 Prunus persica
Psat6g220320 Pisum sativum
QL01p002036 Quercus lobata
QL02p048165 Quercus lobata
RcHm_v2.0_Chr4g0441051 Rosa chinensis
Rhsim09G0067300 Rhododendron simsii
Sabra08G0096900 Salix brachista
Sabra10G0084300 Salix brachista
SalBow8G1681 Salvia bowleyana
Sc04g0005670 Simmondsia chinensis
Sed0000495 Sechium edule
Sed0008603 Sechium edule
Sed0027534 Sechium edule
SGA_v2.0_scaffold39G15159 Striga asiatica
Solyc02g091310.2 Solanum lycopersicum
Solyc05g008300.3 Solanum lycopersicum
Sopen02g035930 Solanum pennellii
Sopen05g004130 Solanum pennellii
Sp1g20460 Schrenkiella parvula
TAR629G0837 Trochodendron aralioides
THA.LOC104809199 Tarenaya hassleriana
Thecc.02G279600 Theobroma cacao
Thhalv10009651m.g Eutrema salsugineum
TPR.G13856 Trifolium pratense
TWI31G0048 Tripterygium wilfordii
unitig_52.g17124 Utricularia gibba
unitig_62.g23731 Utricularia gibba
vmacro00420 Vaccinium macrocarpon
VMungo0720G2306 Vigna mungo
Zm00001eb125730 Zea mays
Zm00001eb334940 Zea mays

User provided reference genes

Program Settings