Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p11170 Brassica napus
A09p36540 Brassica napus
Aa31LG10G6880 Aethionema arabicum
Aa31LG6G5690 Aethionema arabicum
Actinidia19522 Actinidia chinensis
Ah.09g232630 Amaranthus hybridus
AL1G43870 Arabidopsis lyrata
AL4G30480 Arabidopsis lyrata
Aqoxy4G00019 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07RNNT Arachis hypogaea
AT1G29980 Arabidopsis thaliana
AT2G34510 Arabidopsis thaliana
ATR0044G033 Amborella trichopoda
Atru.chr10.1249 Acer truncatum
AUR62024440 Chenopodium quinoa
AUR62026031 Chenopodium quinoa
AUR62030208 Chenopodium quinoa
AUR62039773 Chenopodium quinoa
BcaB02g09536 Brassica carinata
BcaB07g32597 Brassica carinata
BcaB07g32598 Brassica carinata
BcaC02g11513 Brassica carinata
BcaC05g27008 Brassica carinata
BcaC05g27009 Brassica carinata
BolC5t31592H Brassica oleracea
BraA09t39175Z Brassica rapa
C04p14520 Brassica napus
C05p28740 Brassica napus
CAN.G1859.3 Capsicum annuum
CANSAT35G0164 Cannabis sativa
CARHR029410 Cardamine hirsuta
CARHR128600 Cardamine hirsuta
Carub.0001s2823 Capsella rubella
Carub.0004s1618 Capsella rubella
Ca_00548_v3 Cicer arietinum L.
Cc00_g07930 Coffea canephora
CDE09G0598 Ceratophyllum demersum
CDE11G0420 Ceratophyllum demersum
Cfa000954 Carpinus fangiana
Ciclev10015527m.g Citrus clementina
CiPaw.09G124700 Carya illinoinensis
CiPaw.10G092500 Carya illinoinensis
ClCG01G024570 Citrullus lanatus
COL.COLO4_31082 Corchorus olitorius
Cpa.g.sc166.14 Carica papaya
CsaV3_6G051690 Cucumis sativus L.
CSS0006762 Camellia sinensis var. sinensis
DCAR_003920 Daucus carota
Dinv30735 Davidia involucrata
Dinv32264 Davidia involucrata
Duzib160G0678 Durio zibethinus
Duzib192G0976 Durio zibethinus
Duzib235G1007 Durio zibethinus
ECA236G3217 Erigeron canadensis
EL10Ac8g19711 Beta vulgaris
Eucgr.E02406 Eucalyptus grandis
FAN11G3484 Fragaria x ananassa
FAN16G2192 Fragaria x ananassa
FAN21G1891 Fragaria x ananassa
FAN25G3675 Fragaria x ananassa
FvH4_3g05680 Fragaria vesca
Glyma.13G217700 Glycine max
Glyma.15G094700 Glycine max
Gohir.A05G148800 Gossypium hirsutum
Gohir.A10G040200 Gossypium hirsutum
Gohir.D05G151400 Gossypium hirsutum
Gohir.D10G041100 Gossypium hirsutum
Gorai.009G155400 Gossypium raimondii
Gorai.011G043300 Gossypium raimondii
GSVIVG01021443001 Vitis vinifera
HanXRQChr04g0118581 Helianthus annuus
Haze_05585 Corylus avellana
Hma1.2p1_0286F.1_g114080 Hydrangea macrophylla
HPP92_009663 Vanilla planifolia
Hund21530 Selenicereus undatus
Lalb_Chr15g0086891 Lupinus albus
Lalb_Chr20g0118011 Lupinus albus
Lj2A306T69 Lonicera japonica
Lj6g0010836 Lotus japonicus
Lsat_1_v5_gn_7_29861 Lactuca sativa
Manes.15G121000 Manihot esculenta
Manes.17G069400 Manihot esculenta
MBI07_g26357_MAGBIO Magnolia biondii
MBI10_g32112_MAGBIO Magnolia biondii
MD05G1284600 Malus domestica
MD10G1263000 Malus domestica
MD15G1319600 Malus domestica
Medtr2g019600 Medicago truncatula
MELO3C007138.2 Cucumis melo
Migut.H01365 Erythranthe guttata
Migut.M00915 Erythranthe guttata
MSTRG.13251 Avicennia marina
MSTRG.14772 Avicennia marina
Nitab4.5_0002275g0110 Nicotiana tabacum
Nitab4.5_0009607g0010 Nicotiana tabacum
Nn3g20756 Nelumbo nucifera
Nn4g26548 Nelumbo nucifera
Oeu042444.1 Olea europaea
Oeu052378.1 Olea europaea
Os01g0531400 Oryza sativa ssp. japonica
Os01g0756600 Oryza sativa ssp. japonica
Peaxi162Scf01211g00132 Petunia axillaris
PGR042G2081 Punica granatum
PGSC0003DMG400021161 Solanum tuberosum
Phvul.006G164100 Phaseolus vulgaris
Potri.011G087500 Populus trichocarpa
Prupe.4G079800 Prunus persica
Psat1g190720 Pisum sativum
PSO017G1337 Papaver somniferum
PSO170G6316 Papaver somniferum
QL05p058459 Quercus lobata
RcHm_v2.0_Chr5g0013971 Rosa chinensis
Rhsim09G0159400 Rhododendron simsii
Rhsim13G0194600 Rhododendron simsii
Sabra11G0069500 Salix brachista
SalBow7G1051 Salvia bowleyana
Sc17g0004950 Simmondsia chinensis
Sed0015259 Sechium edule
SEGI_15886 Sequoiadendron giganteum
SEGI_18989 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30646 Striga asiatica
SHI24868 Sapria himalayana
Solyc02g070540.3 Solanum lycopersicum
Sopen02g019630 Solanum pennellii
Sp1g25860 Schrenkiella parvula
Sp4g16770 Schrenkiella parvula
TAR629G1290 Trochodendron aralioides
THA.LOC104814294 Tarenaya hassleriana
THA.LOC104820646 Tarenaya hassleriana
Thecc.06G151600 Theobroma cacao
Thhalv10007784m.g Eutrema salsugineum
Thhalv10016749m.g Eutrema salsugineum
TPR.G28609 Trifolium pratense
TWI73G0555 Tripterygium wilfordii
unitig_0.g930 Utricularia gibba
unitig_61.g26079 Utricularia gibba
vmacro03964 Vaccinium macrocarpon
VMungo0540G0940 Vigna mungo
Zm00001eb152750 Zea mays
Zm00001eb370700 Zea mays

User provided reference genes

Program Settings