Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06230 Brassica napus
A07p21440 Brassica napus
Aa31LG10G8270 Aethionema arabicum
Aa31LG10G8380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1669 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2032 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2036 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2054 Anthoceros agrestis
Actinidia26660 Actinidia chinensis
Actinidia28910 Actinidia chinensis
AL5G34100 Arabidopsis lyrata
Aqoxy1G01137 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4RQ7RI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BM4P4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9EGN0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJQ5D0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EAT06N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H635BA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3Z787 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9B6QC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WMHD1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XN7WR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3AS8D Arachis hypogaea
AT3G53220 Arabidopsis thaliana
ATR0776G022 Amborella trichopoda
Atru.chr8.1787 Acer truncatum
AUR62030367 Chenopodium quinoa
AUR62040850 Chenopodium quinoa
BcaB02g07801 Brassica carinata
BcaB02g08532 Brassica carinata
BcaC02g09178 Brassica carinata
BcaC02g09179 Brassica carinata
BolC4t25546H Brassica oleracea
BolC6t37290H Brassica oleracea
BraA04t16327Z Brassica rapa
BraA07t29831Z Brassica rapa
C04p39740 Brassica napus
C06p21050 Brassica napus
CAN.G900.23 Capsicum annuum
CANSAT80G0106 Cannabis sativa
CARHR163080 Cardamine hirsuta
Carub.0005s1975 Capsella rubella
Ca_08909_v3 Cicer arietinum L.
CBR_g19638 Chara braunii
Cc06_g04340 Coffea canephora
CDE09G0643 Ceratophyllum demersum
Cfa017630 Carpinus fangiana
Ciclev10017163m.g Citrus clementina
CiPaw.09G171400 Carya illinoinensis
ClCG04G009330 Citrullus lanatus
COL.COLO4_26945 Corchorus olitorius
Cre01.g027450 Chlamydomonas reinhardtii
CsaV3_6G039920 Cucumis sativus L.
CSS0014192 Camellia sinensis var. sinensis
CSS0019333 Camellia sinensis var. sinensis
DCAR_015003 Daucus carota
Dinv35793 Davidia involucrata
Dinv37322 Davidia involucrata
Duzib106G1340 Durio zibethinus
Duzib128G0902 Durio zibethinus
ECA248G2056 Erigeron canadensis
EL10Ac3g07190 Beta vulgaris
Eucgr.A01667 Eucalyptus grandis
FAN02G0799 Fragaria x ananassa
FAN05G1419 Fragaria x ananassa
FAN05G2954 Fragaria x ananassa
FAN09G1715 Fragaria x ananassa
FAN14G0704 Fragaria x ananassa
FAN15G0973 Fragaria x ananassa
FvH4_6g16520 Fragaria vesca
Glyma.03G184100 Glycine max
Glyma.19G184600 Glycine max
Gohir.A04G071800 Gossypium hirsutum
Gohir.A09G145800 Gossypium hirsutum
Gohir.D04G110300 Gossypium hirsutum
Gorai.006G162600 Gossypium raimondii
Gorai.009G414400 Gossypium raimondii
GSVIVG01033652001 Vitis vinifera
HanXRQChr11g0350471 Helianthus annuus
Haze_20523 Corylus avellana
Hma1.2p1_0828F.1_g225120 Hydrangea macrophylla
HPP92_021403 Vanilla planifolia
HPP92_027104 Vanilla planifolia
Hund19112 Selenicereus undatus
Hund24635 Selenicereus undatus
Lalb_Chr20g0112581 Lupinus albus
Lj1g0026290 Lotus japonicus
Lsat_1_v5_gn_1_51620 Lactuca sativa
Lsat_1_v5_gn_2_107281 Lactuca sativa
Manes.08G011600 Manihot esculenta
Mapoly0103s0022 Marchantia polymorpha
MBI18_g19057_MAGBIO Magnolia biondii
MCO09G819 Micromonas commoda
MD04G1091800 Malus domestica
MD12G1109800 Malus domestica
Medtr7g102130 Medicago truncatula
MELO3C024468.2 Cucumis melo
Migut.L01710 Erythranthe guttata
MSTRG.26689 Avicennia marina
Nitab4.5_0000578g0070 Nicotiana tabacum
Nitab4.5_0008624g0010 Nicotiana tabacum
Nn6g35270 Nelumbo nucifera
Os04g0560200 Oryza sativa ssp. japonica
Peaxi162Scf00722g00002 Petunia axillaris
PGR004G0040 Punica granatum
PGSC0003DMG400003891 Solanum tuberosum
Phvul.001G179600 Phaseolus vulgaris
Potri.006G123100 Populus trichocarpa
Pp3c9_9220 Physcomitrium patens
PRCOL_00001867 Prasinoderma coloniale
Prupe.7G128400 Prunus persica
Psat3g042120 Pisum sativum
PSO063G2125 Papaver somniferum
PSO339G4566 Papaver somniferum
QL07p043063 Quercus lobata
RcHm_v2.0_Chr3g0470431 Rosa chinensis
Rhsim03G0090700 Rhododendron simsii
Sabra06G0097400 Salix brachista
SalBow6G0361 Salvia bowleyana
Sc02g0001580 Simmondsia chinensis
Sed0015565 Sechium edule
SGA_v2.0_scaffold84G26539 Striga asiatica
SGA_v2.0_scaffold90G27758 Striga asiatica
SMO203G0200 Selaginella moellendorffii
Solyc09g008290.4 Solanum lycopersicum
Sopen09g003110 Solanum pennellii
Sp5g09120 Schrenkiella parvula
TAR369G0910 Trochodendron aralioides
TAR623G1526 Trochodendron aralioides
THA.LOC104805223 Tarenaya hassleriana
Thecc.05G068800 Theobroma cacao
Thhalv10010819m.g Eutrema salsugineum
Thhalv10017445m.g Eutrema salsugineum
TPR.G10764 Trifolium pratense
TPR.G32842 Trifolium pratense
TPR.G40470 Trifolium pratense
TWI53G1613 Tripterygium wilfordii
vmacro07300 Vaccinium macrocarpon
VMungo1383G1956 Vigna mungo
Zm00001eb074150 Zea mays

User provided reference genes

Program Settings