Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p09680 Brassica napus
Aa31LG5G21270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5575 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3294 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2334 Anthoceros agrestis
Actinidia07914 Actinidia chinensis
Actinidia31260 Actinidia chinensis
Ah.08g210410 Amaranthus hybridus
AL4G32220 Arabidopsis lyrata
Aqoxy2G01070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3FLQ2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0B92H Arachis hypogaea
AT2G36130 Arabidopsis thaliana
ATR0820G293 Amborella trichopoda
Atru.BG.210.p Acer truncatum
AUR62006228 Chenopodium quinoa
AUR62036982 Chenopodium quinoa
BcaB02g09381 Brassica carinata
BcaB06g28917 Brassica carinata
BcaC02g07629 Brassica carinata
BcaC02g11719 Brassica carinata
BolC4t22846H Brassica oleracea
BolC4t27997H Brassica oleracea
BraA05t19924Z Brassica rapa
C04p12020 Brassica napus
CAN.G397.88 Capsicum annuum
CANSAT64G1969 Cannabis sativa
CARHR130370 Cardamine hirsuta
Carub.0004s1790 Capsella rubella
Ca_09024_v3 Cicer arietinum L.
Cc06_g06170 Coffea canephora
CDE04G1161 Ceratophyllum demersum
CDE12G0081 Ceratophyllum demersum
Cfa016646 Carpinus fangiana
Ciclev10012962m.g Citrus clementina
CiPaw.09G017200 Carya illinoinensis
ClCG10G018730 Citrullus lanatus
COL.COLO4_29671 Corchorus olitorius
Cpa.g.sc104.93 Carica papaya
Cre12.g499400 Chlamydomonas reinhardtii
CsaV3_3G037500 Cucumis sativus L.
CSS0015780 Camellia sinensis var. sinensis
CSS0026341 Camellia sinensis var. sinensis
DCAR_020736 Daucus carota
Dinv21168 Davidia involucrata
Duzib093G0049 Durio zibethinus
Duzib128G1004 Durio zibethinus
ECA238G0760 Erigeron canadensis
EL10Ac7g16869 Beta vulgaris
Eucgr.K02569 Eucalyptus grandis
FAN02G2043 Fragaria x ananassa
FAN05G0373 Fragaria x ananassa
FAN05G1768 Fragaria x ananassa
FAN09G3615 Fragaria x ananassa
FAN14G3915 Fragaria x ananassa
FvH4_6g19480 Fragaria vesca
Glyma.03G198200 Glycine max
Glyma.19G196100 Glycine max
Gohir.A01G204600 Gossypium hirsutum
Gohir.D01G194000 Gossypium hirsutum
Gorai.002G238100 Gossypium raimondii
GSVIVG01033892001 Vitis vinifera
HanXRQChr14g0438361 Helianthus annuus
Haze_19652 Corylus avellana
Hma1.2p1_0769F.1_g215720 Hydrangea macrophylla
HPP92_000054 Vanilla planifolia
Hund19895 Selenicereus undatus
Lalb_Chr20g0111591 Lupinus albus
Lj1g0009347 Lotus japonicus
Lj2A143G26 Lonicera japonica
Lj5P127T28 Lonicera japonica
Lsat_1_v5_gn_2_56480 Lactuca sativa
Manes.09G052200 Manihot esculenta
Mapoly0028s0032 Marchantia polymorpha
Mapoly0066s0119 Marchantia polymorpha
Mapoly0090s0089 Marchantia polymorpha
MBI17_g04164_MAGBIO Magnolia biondii
MCO11G066 Micromonas commoda
MD08G1072300 Malus domestica
MD12G1030900 Malus domestica
MD12G1204000 Malus domestica
MD14G1031400 Malus domestica
Medtr7g105220 Medicago truncatula
MELO3C009493.2 Cucumis melo
Migut.J01001 Erythranthe guttata
MSTRG.19277 Avicennia marina
Nitab4.5_0000573g0110 Nicotiana tabacum
Nn6g34813 Nelumbo nucifera
Oeu025664.3 Olea europaea
Oeu058560.1 Olea europaea
Oeu058561.1 Olea europaea
Os08g0559400 Oryza sativa ssp. japonica
Peaxi162Scf00069g00214 Petunia axillaris
PGR142G1211 Punica granatum
PGSC0003DMG400008860 Solanum tuberosum
Phvul.001G192400 Phaseolus vulgaris
Potri.016G075600 Populus trichocarpa
Pp3c11_21390 Physcomitrium patens
Pp3c20_2420 Physcomitrium patens
Pp3c22_5330 Physcomitrium patens
Pp3c23_17310 Physcomitrium patens
Pp3c8_17970 Physcomitrium patens
PRCOL_00001329 Prasinoderma coloniale
Prupe.7G101500 Prunus persica
Psat3g031520 Pisum sativum
PSO339G5571 Papaver somniferum
PSO801G0804 Papaver somniferum
QL07p038139 Quercus lobata
RcHm_v2.0_Chr3g0474811 Rosa chinensis
RcHm_v2.0_Chr6g0284611 Rosa chinensis
Rhsim04G0131000 Rhododendron simsii
Sabra16G0078100 Salix brachista
Sabra16G0081000 Salix brachista
SalBow3G4068 Salvia bowleyana
Sc20g0006420 Simmondsia chinensis
Sed0021332 Sechium edule
SEGI_01285 Sequoiadendron giganteum
SEGI_39454 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34311 Striga asiatica
SGA_v2.0_scaffold201G41392 Striga asiatica
SGA_v2.0_scaffold212G42199 Striga asiatica
SGA_v2.0_scaffold31G12892 Striga asiatica
SGA_v2.0_scaffold515G52656 Striga asiatica
SMO117G0290 Selaginella moellendorffii
SMO197G0025 Selaginella moellendorffii
SMO367G0968 Selaginella moellendorffii
Solyc09g010190.3 Solanum lycopersicum
Sopen09g004930 Solanum pennellii
Sp4g18370 Schrenkiella parvula
TAR369G0302 Trochodendron aralioides
TAR623G1099 Trochodendron aralioides
THA.LOC104799753 Tarenaya hassleriana
Thecc.05G095400 Theobroma cacao
Thhalv10017336m.g Eutrema salsugineum
TPR.G23317 Trifolium pratense
TWI74G1271 Tripterygium wilfordii
unitig_26.g9257 Utricularia gibba
vmacro08749 Vaccinium macrocarpon
VMungo1383G1355 Vigna mungo
Zm00001eb039360 Zea mays

User provided reference genes

Program Settings